RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 TMEM196Q5HYL7 178 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 ATG16L1Q676U5 607 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 SDE2Q6IQ49 451 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 LIPIQ6XZB0 460 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 RFLNAQ6ZTI6 216 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 FAM47EQ6ZV65 393 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 ZNF771Q7L3S4 317 aaPredicted RBP13.63□□□□□ -0.23
TRAF4-210ENST00000475329 TRMT11Q7Z4G4 463 aaKnown RBP13.63□□□□□ -0.23
TRAF4-210ENST00000475329 RAVER1Q8IY67 606 aaKnown RBP13.63□□□□□ -0.23
TRAF4-210ENST00000475329 NRSN1Q8IZ57 195 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 PPP1R14CQ8TAE6 165 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 DTX3LQ8TDB6 740 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 HEXDCQ8WVB3 486 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 PPM1EQ8WY54 764 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 KCNJ9Q92806 393 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 RAB7BQ96AH8 199 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 GRAMD1AQ96CP6 724 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 MSANTD3Q96H12 275 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 UBXN10Q96LJ8 280 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 GPR78Q96P69 363 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 MRPL57Q9BQC6 102 aaKnown RBP13.63□□□□□ -0.23
TRAF4-210ENST00000475329 SPATA16Q9BXB7 569 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 FAM83DQ9H4H8 585 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 FBRSQ9HAH7 460 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 SYTL2Q9HCH5 934 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 ZDHHC3Q9NYG2 299 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 TRMT6Q9UJA5 497 aaKnown RBP13.63□□□□□ -0.23
TRAF4-210ENST00000475329 ITM2BQ9Y287 266 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 OAS3Q9Y6K5 1087 aaKnown RBP13.63□□□□□ -0.23
TRAF4-210ENST00000475329 E5RI56 91 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 TK2O00142 265 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 AREL1O15033 823 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 EDF1O60869 148 aaKnown RBP13.62□□□□□ -0.23
TRAF4-210ENST00000475329 NIPSNAP2O75323 286 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 GLULP15104 373 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 ZNF37AP17032 561 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-210ENST00000475329 CA5AP35218 305 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 ETV3P41162 512 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 GLRBP48167 497 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 CST6Q15828 149 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 ZNF284Q2VY69 593 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 LEXMQ3ZCV2 418 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 TMEM52BQ4KMG9 183 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 ATP13A5Q4VNC0 1218 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 TECRLQ5HYJ1 363 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 GKAP1Q5VSY0 366 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-210ENST00000475329 ZNF776Q68DI1 518 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-210ENST00000475329 PTRHD1Q6GMV3 140 aaKnown RBP13.62□□□□□ -0.23
TRAF4-210ENST00000475329 UGT3A1Q6NUS8 523 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 ZYG11AQ6WRX3 759 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 Q6ZVL8 140 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 Q7L0L9 218 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 TECPR1Q7Z6L1 1165 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 FSTL5Q8N475 847 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-210ENST00000475329 TRAM1L1Q8N609 369 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 GPR21Q99679 349 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 GABRG3Q99928 467 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 ZSCAN5AQ9BUG6 496 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 WRAP53Q9BUR4 548 aaKnown RBP13.62□□□□□ -0.23
TRAF4-210ENST00000475329 TSSK1BQ9BXA7 367 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 PITPNM3Q9BZ71 974 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 MRPL46Q9H2W6 279 aaKnown RBP13.62□□□□□ -0.23
TRAF4-210ENST00000475329 SMOXQ9NWM0 555 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 XPR1Q9UBH6 696 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 CD84Q9UIB8 345 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 FAM50BQ9Y247 325 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 MED16Q9Y2X0 877 aa13.62□□□□□ -0.23
TRAF4-210ENST00000475329 G3V2L1 256 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 PLK4O00444 970 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 NEMP1O14524 444 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 WNT9AO14904 365 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 H2AFYO75367 372 aaKnown RBP13.61□□□□□ -0.23
TRAF4-210ENST00000475329 KLF8O95600 359 aaPredicted RBP13.61□□□□□ -0.23
TRAF4-210ENST00000475329 ASGR2P07307 311 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 RBP1P09455 135 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 FGF3P11487 239 aaPredicted RBP13.61□□□□□ -0.23
TRAF4-210ENST00000475329 C5AR1P21730 350 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 KCNA4P22459 653 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 P2RY2P41231 377 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 SKIV2L2P42285 1042 aaKnown RBP13.61□□□□□ -0.23
TRAF4-210ENST00000475329 NSG1P42857 185 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 LIG3P49916 1009 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 PRKAA2P54646 552 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 MRPS21P82921 87 aaKnown RBP13.61□□□□□ -0.23
TRAF4-210ENST00000475329 SATB1Q01826 763 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 CNTN1Q12860 1018 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 ACAP2Q15057 778 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 C2orf27AQ580R0 203 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 HENMT1Q5T8I9 393 aaKnown RBP13.61□□□□□ -0.23
TRAF4-210ENST00000475329 TMEM207Q6UWW9 146 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 ZNF765Q7L2R6 523 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 CYP2U1Q7Z449 544 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 C10orf107Q8IVU9 208 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 CACNA2D3Q8IZS8 1091 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 SPATA6LQ8N4H0 392 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 OR2T3Q8NH03 318 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 ANKRD49Q8WVL7 239 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 FAM136AQ96C01 138 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 ERLEC1Q96DZ1 483 aa13.61□□□□□ -0.23
TRAF4-210ENST00000475329 DTD2Q96FN9 168 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms