RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 RDH14Q9HBH5 336 aa15.03■□□□□ -0
VARS-223ENST00000474643 ZNHIT2Q9UHR6 403 aa15.03■□□□□ -0
VARS-223ENST00000474643 ZKSCAN5Q9Y2L8 839 aa15.03■□□□□ -0
VARS-223ENST00000474643 TMEM98Q9Y2Y6 226 aa15.03■□□□□ -0
VARS-223ENST00000474643 PTPRQQ9UMZ3 2332 aa15.02■□□□□ -0
VARS-223ENST00000474643 A0A0U1RQS6 177 aa15.02■□□□□ -0
VARS-223ENST00000474643 MSNP26038 577 aaKnown RBP15.02■□□□□ -0
VARS-223ENST00000474643 PTPN3P26045 913 aa15.02■□□□□ -0
VARS-223ENST00000474643 OR1D5P58170 312 aa15.02■□□□□ -0
VARS-223ENST00000474643 RPL26P61254 145 aaKnown RBP15.02■□□□□ -0
VARS-223ENST00000474643 CFHR1Q03591 330 aa15.02■□□□□ -0
VARS-223ENST00000474643 PCSK7Q16549 785 aa15.02■□□□□ -0
VARS-223ENST00000474643 ALG1LQ6GMV1 187 aa15.02■□□□□ -0
VARS-223ENST00000474643 CCDC70Q6NSX1 233 aa15.02■□□□□ -0
VARS-223ENST00000474643 USP53Q70EK8 1073 aa15.02■□□□□ -0
VARS-223ENST00000474643 ZNF765Q7L2R6 523 aa15.02■□□□□ -0
VARS-223ENST00000474643 KDELC2Q7Z4H8 507 aa15.02■□□□□ -0
VARS-223ENST00000474643 SFTPA2Q8IWL1 248 aa15.02■□□□□ -0
VARS-223ENST00000474643 CNTD1Q8N815 330 aa15.02■□□□□ -0
VARS-223ENST00000474643 ZSCAN1Q8NBB4 408 aa15.02■□□□□ -0
VARS-223ENST00000474643 ARRDC2Q8TBH0 407 aa15.02■□□□□ -0
VARS-223ENST00000474643 SCAMP4Q969E2 229 aa15.02■□□□□ -0
VARS-223ENST00000474643 FAM118BQ9BPY3 351 aa15.02■□□□□ -0
VARS-223ENST00000474643 RIOK2Q9BVS4 552 aaKnown RBP15.02■□□□□ -0
VARS-223ENST00000474643 SLC25A51Q9H1U9 297 aa15.02■□□□□ -0
VARS-223ENST00000474643 GLOD4Q9HC38 313 aa15.02■□□□□ -0
VARS-223ENST00000474643 KCNK4Q9NYG8 393 aa15.02■□□□□ -0
VARS-223ENST00000474643 PYCARDQ9ULZ3 195 aa15.02■□□□□ -0
VARS-223ENST00000474643 RPL26L1Q9UNX3 145 aaKnown RBP15.02■□□□□ -0
VARS-223ENST00000474643 SLC17A4Q9Y2C5 497 aa15.02■□□□□ -0
VARS-223ENST00000474643 PPIL1Q9Y3C6 166 aa15.02■□□□□ -0
VARS-223ENST00000474643 PCDHGA7Q9Y5G6 932 aa15.02■□□□□ -0
VARS-223ENST00000474643 CLDN7O95471 211 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 FGF1P05230 155 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 RBP3P10745 1247 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 ITIH1P19827 911 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 RBL1P28749 1068 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 STC1P52823 247 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 SKOR1P84550 965 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 CLN3Q13286 438 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 LRP8Q14114 963 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 MANEAQ5SRI9 462 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 MEI1Q5TIA1 1274 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 TECPR1Q7Z6L1 1165 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 ZNF605Q86T29 641 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 TEKT5Q96M29 485 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 VAT1Q99536 393 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 SLC38A3Q99624 504 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 HERPUD2Q9BSE4 406 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 MLPHQ9BV36 600 aaPredicted RBP15.01□□□□□ -0.01
VARS-223ENST00000474643 C10orf88Q9H8K7 445 aa15.01□□□□□ -0.01
VARS-223ENST00000474643 FASNP49327 2511 aaKnown RBP15.01□□□□□ -0.01
VARS-223ENST00000474643 F5H423 210 aaPredicted RBP15□□□□□ -0.01
VARS-223ENST00000474643 KCNN4O15554 427 aa15□□□□□ -0.01
VARS-223ENST00000474643 FZD6O60353 706 aa15□□□□□ -0.01
VARS-223ENST00000474643 TUBB4AP04350 444 aa15□□□□□ -0.01
VARS-223ENST00000474643 LIPCP11150 499 aa15□□□□□ -0.01
VARS-223ENST00000474643 CSTF2P33240 577 aaKnown RBP eCLIP15□□□□□ -0.01
VARS-223ENST00000474643 GPR3P46089 330 aa15□□□□□ -0.01
VARS-223ENST00000474643 PTSQ03393 145 aa15□□□□□ -0.01
VARS-223ENST00000474643 GALNT3Q14435 633 aa15□□□□□ -0.01
VARS-223ENST00000474643 CLPPQ16740 277 aaPredicted RBP15□□□□□ -0.01
VARS-223ENST00000474643 RFLNAQ6ZTI6 216 aa15□□□□□ -0.01
VARS-223ENST00000474643 CHST15Q7LFX5 561 aaPredicted RBP15□□□□□ -0.01
VARS-223ENST00000474643 NRROSQ86YC3 692 aa15□□□□□ -0.01
VARS-223ENST00000474643 PATE1Q8WXA2 126 aa15□□□□□ -0.01
VARS-223ENST00000474643 IMP4Q96G21 291 aaKnown RBP15□□□□□ -0.01
VARS-223ENST00000474643 SMIM14Q96QK8 99 aa15□□□□□ -0.01
VARS-223ENST00000474643 ARHGAP9Q9BRR9 750 aa15□□□□□ -0.01
VARS-223ENST00000474643 SEMA6CQ9H3T2 930 aa15□□□□□ -0.01
VARS-223ENST00000474643 FAM83DQ9H4H8 585 aa15□□□□□ -0.01
VARS-223ENST00000474643 UBP1Q9NZI7 540 aa15□□□□□ -0.01
VARS-223ENST00000474643 RSPH14Q9UHP6 348 aa15□□□□□ -0.01
VARS-223ENST00000474643 TRHDEQ9UKU6 1024 aa15□□□□□ -0.01
VARS-223ENST00000474643 TRBV23OR9-2A0A075B6M9 112 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 PRAMEF33A0A0G2JMD5 474 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 K7ENP7 123 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 NVLO15381 856 aaKnown RBP14.99□□□□□ -0.01
VARS-223ENST00000474643 DUX1O43812 170 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 KIF5CO60282 957 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 SNX2O60749 519 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 PRAMEF10O60809 474 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 PMPCBO75439 489 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 ZNF189O75820 626 aaPredicted RBP14.99□□□□□ -0.01
VARS-223ENST00000474643 MT-CYBP00156 380 aaPredicted RBP14.99□□□□□ -0.01
VARS-223ENST00000474643 MMP2P08253 660 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 SLC2A4P14672 509 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 NFKB1P19838 968 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 WASHC5Q12768 1159 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 ZNF569Q5MCW4 686 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 ITPRIPL1Q6GPH6 555 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 INO80CQ6PI98 192 aaPredicted RBP14.99□□□□□ -0.01
VARS-223ENST00000474643 FAM129CQ86XR2 697 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 PHYKPLQ8IUZ5 450 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 ZNF567Q8N184 647 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 RCBTB1Q8NDN9 531 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 OR10G6Q8NH81 332 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 SPATA22Q8NHS9 363 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 USP7Q93009 1102 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 CCDC74BQ96LY2 380 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms