RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 TBC1D1Q86TI0 1168 aaPredicted RBP3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 TSPAN33Q86UF1 283 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 ADGRF2Q8IZF7 708 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 EVPLQ92817 2033 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 PERPQ96FX8 193 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 CMTM3Q96MX0 182 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 CSF3RQ99062 836 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 MTERF1Q99551 399 aaKnown RBP3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 LRRC1Q9BTT6 524 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 ITPAQ9BY32 194 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 KCNN2Q9H2S1 579 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 POLR1BQ9H9Y6 1135 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 EPB41L5Q9HCM4 733 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 TBC1D22BQ9NU19 505 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 TMEM30AQ9NV96 361 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 CNOT8Q9UFF9 292 aaKnown RBP3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 CORO1CQ9ULV4 474 aaPredicted RBP3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 TMEM184BQ9Y519 407 aaPredicted RBP3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 PCDHAC2Q9Y5I4 1007 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 C15orf62A8K5M9 175 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 SMAD9O15198 467 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 OGG1O15527 345 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 BUB3O43684 328 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 F7P08709 466 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 AMD1P17707 334 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 POLR2CP19387 275 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 TM4SF1P30408 202 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 MMP14P50281 582 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 CTSCP53634 463 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 NLRP5P59047 1200 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 CEBPZQ03701 1054 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 EEF1A2Q05639 463 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 SLC20A2Q08357 652 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 GRSF1Q12849 480 aaKnown RBP eCLIP3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 ZBTB17Q13105 803 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 ZNF672Q499Z4 452 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 PAPPA-AS1Q5QFB9 102 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 PLEKHS1Q5SXH7 462 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 RARS2Q5T160 578 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 C18orf63Q68DL7 685 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 MZT2BQ6NZ67 158 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 GALNT5Q7Z7M9 940 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 NRROSQ86YC3 692 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 ARID3BQ8IVW6 561 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 C1orf87Q8N0U7 546 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 BEST3Q8N1M1 668 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 SRBD1Q8N5C6 995 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 ANKRD52Q8NB46 1076 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 RDM1Q8NG50 284 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 SPATA22Q8NHS9 363 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 LMO3Q8TAP4 145 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 KCNG4Q8TDN1 519 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 TMEM255BQ8WV15 326 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 RND1Q92730 232 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 PPP1R13BQ96KQ4 1090 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 NEUROD6Q96NK8 337 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 DACH2Q96NX9 599 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 SYT17Q9BSW7 474 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 MAK16Q9BXY0 300 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 SPRY4Q9C004 299 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 SMARCAD1Q9H4L7 1026 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 KLHL1Q9NR64 748 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 NSMCE4AQ9NXX6 385 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 OGFRQ9NZT2 677 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 PADI1Q9ULC6 663 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 ICAM5Q9UMF0 924 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 NENFQ9UMX5 172 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 EXO1Q9UQ84 846 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 CLIC4Q9Y696 253 aa3.22□□□□□ -1.89
ECHDC1-213ENST00000474240 TCF20Q9UGU0 1960 aaKnown RBP3.21□□□□□ -1.89
ECHDC1-213ENST00000474240 FAM90A26D6RGX4 464 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 AP3D1O14617 1153 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 ATP2A1O14983 1001 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 ANKRD28O15084 1053 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 WDR1O75083 606 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 CAMTA2O94983 1202 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 FAM106CPP0CH98 169 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 ANOS1P23352 680 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 APOBEC1P41238 236 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 CAMPP49913 170 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 PDLIM4P50479 330 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 GPR143P51810 404 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 GALCP54803 685 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 CDH8P55286 799 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 PLIN5Q00G26 463 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 GAGE2BQ13066 116 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 MVPQ14764 893 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 GAGE2EQ4V326 116 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 CCNYL2Q5T2Q4 361 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 GKAP1Q5VSY0 366 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 LCN10Q6JVE6 187 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 GAGE2AQ6NT46 116 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 TPRG1Q6ZUI0 275 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 FOXL2NBQ6ZUU3 175 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 PM20D2Q8IYS1 436 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 GCSAMQ8N6F7 178 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 EMC1Q8N766 993 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 IL17RCQ8NAC3 791 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms