RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 NOP2P46087 812 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 GPR1P46091 355 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 NSFP46459 744 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 RENBPP51606 427 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 GFERP55789 205 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 JAM2P57087 298 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 OGDHQ02218 1023 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 IL10RBQ08334 325 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 SLC10A7Q0GE19 358 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 TRAF2Q12933 501 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 LBRQ14739 615 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 CA9Q16790 459 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 TPD52L1Q16890 204 aaPredicted RBP5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 CLEC16AQ2KHT3 1053 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 NADK2Q4G0N4 442 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 HSP90AA4PQ58FG1 418 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 LCE2CQ5TA81 110 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 CPZQ66K79 652 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 DNAJC24Q6P3W2 148 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 IYDQ6PHW0 289 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 C6orf15Q6UXA7 325 aaPredicted RBP5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 RFX8Q6ZV50 586 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 CYP4V2Q6ZWL3 525 aaPredicted RBP5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 USP45Q70EL2 814 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 ZNF765Q7L2R6 523 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 MAMDC2Q7Z304 686 aaPredicted RBP5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 PHF13Q86YI8 300 aaPredicted RBP5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 PLXDC1Q8IUK5 500 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 APLFQ8IW19 511 aaPredicted RBP5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 FAM114A1Q8IWE2 563 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 TP53INP2Q8IXH6 220 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 PGBD5Q8N414 524 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 MLKLQ8NB16 471 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 GALNT6Q8NCL4 622 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 PDCD6IPQ8WUM4 868 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 SCAMP4Q969E2 229 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 AP2M1Q96CW1 435 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 STAMBPL1Q96FJ0 436 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 SCRN2Q96FV2 425 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 ZNF599Q96NL3 588 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 CDK15Q96Q40 435 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 NUDCD1Q96RS6 583 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 AGAP2Q99490 1192 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 MGME1Q9BQP7 344 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 HERPUD2Q9BSE4 406 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 TBC1D10AQ9BXI6 508 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 TRIM55Q9BYV6 548 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 ABCG8Q9H221 673 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 VPS16Q9H269 839 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 EPB41L1Q9H4G0 881 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 STN1Q9H668 368 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 NOD2Q9HC29 1040 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 RCOR3Q9P2K3 495 aaPredicted RBP5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 KLHL3Q9UH77 587 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 CD84Q9UIB8 345 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 KCND3Q9UK17 655 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 AP4E1Q9UPM8 1137 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 PRKAB1Q9Y478 270 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 MAP4K5Q9Y4K4 846 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 CCDC168Q8NDH2 2452 aa5.08□□□□□ -1.6
SNRNP40-204ENST00000474025 KIR2DS5A0A0G2JLQ3 304 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 A0A0G2JNG1 304 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 PIPSLA2A3N6 862 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 ANKRD62A6NC57 917 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 GOLGA6L3A6NEY3 463 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 WIPF3A6NGB9 483 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 EIF3CLB5ME19 914 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 KIR2DS3K7RE56 304 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 EPHB6O15197 1021 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 INPP4BO15327 924 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 KATNA1O75449 491 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 CREG1O75629 220 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 KIAA0754O94854 1291 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 NDUFA10O95299 355 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 CLDN1O95832 211 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 RECKO95980 971 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 ATP1A1P05023 1023 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 F3P13726 295 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 CTPS1P17812 591 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 ERCC2P18074 760 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 NFKBIAP25963 317 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 COL8A1P27658 744 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 CASP14P31944 242 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 HSPA9P38646 679 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 GARSP41250 739 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 KLK7P49862 253 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 PGDP52209 483 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 STC1P52823 247 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 POLR2FP61218 127 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 UBE2IP63279 158 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 PTSQ03393 145 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 FOXM1Q08050 763 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 MRPL49Q13405 166 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 SEMA5AQ13591 1074 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 DNASE1L3Q13609 305 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 DPYSQ14117 519 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 ZNF235Q14590 738 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 IL11RAQ14626 422 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 KIR2DS5Q14953 304 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 CAMK4Q16566 473 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms