RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 AFMIDQ63HM1 303 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 NXNQ6DKJ4 435 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 AAGABQ6PD74 315 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 GALNT7Q86SF2 657 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 SCD5Q86SK9 330 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 LRRTM3Q86VH5 581 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 ARHGAP12Q8IWW6 846 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 KLHDC8BQ8IXV7 354 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 COLGALT2Q8IYK4 626 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 ULK2Q8IYT8 1036 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC25A41Q8N5S1 370 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 CCNYL1Q8N7R7 359 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 OR6P1Q8NGX9 317 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 OVCA2Q8WZ82 227 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 PEX13Q92968 403 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 IMP4Q96G21 291 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 NAF1Q96HR8 494 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 FEM1CQ96JP0 617 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 CNDP1Q96KN2 507 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 ZNF599Q96NL3 588 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 ASB2Q96Q27 587 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 TMEM209Q96SK2 561 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 AGAP2Q99490 1192 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 THTPAQ9BU02 230 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 TRMOQ9BU70 441 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 SGPP1Q9BX95 441 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 ARHGAP39Q9C0H5 1083 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 DRC3Q9H069 523 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 CCDC68Q9H2F9 335 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 NT5MQ9NPB1 228 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 PFDN4Q9NQP4 134 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 TMLHEQ9NVH6 421 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 FAM86C1Q9NVL1 165 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 OXSMQ9NWU1 459 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 TAS2R1Q9NYW7 299 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC17A6Q9P2U8 582 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 STX18Q9P2W9 335 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 SRRDQ9UH36 339 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 RAPGEFL1Q9UHV5 662 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 MBD1Q9UIS9 605 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 EMCNQ9ULC0 261 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 PRPF19Q9UMS4 504 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 TRIP11Q15643 1979 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 SCN10AQ9Y5Y9 1956 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 CCDC78A2IDD5 438 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 C2orf71A6NGG8 1288 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 CCDC85CA6NKD9 419 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 ARVCFO00192 962 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 RFXAPO00287 272 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 ENTPD5O75356 428 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 GPC4O75487 556 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 PIGNO95427 931 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 BAG2O95816 211 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 GLP2RO95838 553 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 MT-CYBP00156 380 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 SERPINF2P08697 491 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 OR4Q2P0C623 313 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 TACR2P21452 398 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 PMLP29590 882 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 OR1E1P30953 314 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 VIPR1P32241 457 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 ADRA1AP35348 466 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 GCKP35557 465 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 PPARGP37231 505 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 AVPR1AP37288 418 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 PBX3P40426 434 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 CD86P42081 329 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC1A2P43004 574 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 GJA8P48165 433 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 GIPRP48546 466 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 PTDSS1P48651 473 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 RGS19P49795 217 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 DNAJB13P59910 316 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 STX1BP61266 288 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 FAM189BP81408 668 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 MRPS35P82673 323 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 CYP4F8P98187 520 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 SATB1Q01826 763 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 GPR17Q13304 367 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 ART3Q13508 389 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 CUL3Q13618 768 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 BTG3Q14201 252 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 RFTN1Q14699 578 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 HERC3Q15034 1050 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 DDR2Q16832 855 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 ZNF385BQ569K4 471 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 MS4A13Q5J8X5 152 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 CLLU1OSQ5K130 101 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 SH2D4BQ5SQS7 431 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 TSTD2Q5T7W7 516 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 PIK3R6Q5UE93 754 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 SNX30Q5VWJ9 437 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 HLA-DQA1Q5Y7H0 255 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 RAP1GAP2Q684P5 730 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 TRIM68Q6AZZ1 485 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 CCSAPQ6IQ19 270 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 KIAA1841Q6NSI8 718 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 FAM45BPQ6NSW5 357 aa5.88□□□□□ -1.47
ATPAF1-204ENST00000474020 EPGNQ6UW88 154 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms