RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 GPBAR1Q8TDU6 330 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 SCARF2Q96GP6 870 aaPredicted RBP13.62□□□□□ -0.23
USF1-205ENST00000473969 C19orf43Q9BQ61 176 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 ASB8Q9H765 288 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 CAAP1Q9H8G2 361 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 ARFGAP3Q9NP61 516 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 BFARQ9NZS9 450 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 ATXN10Q9UBB4 475 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 FKBPLQ9UIM3 349 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 KCTD3Q9Y597 815 aa13.62□□□□□ -0.23
USF1-205ENST00000473969 OAS3Q9Y6K5 1087 aaKnown RBP13.62□□□□□ -0.23
USF1-205ENST00000473969 TP53BP1Q12888 1972 aaPredicted RBP13.62□□□□□ -0.23
USF1-205ENST00000473969 GRID2O43424 1007 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 NUAK1O60285 661 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 UGT1A9O60656 530 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 SRP72O76094 671 aaKnown RBP13.61□□□□□ -0.23
USF1-205ENST00000473969 GIMD1P0DJR0 217 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 RALBP11234 206 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 UGT1A6P19224 532 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 MSH3P20585 1137 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 UGT1A1P22309 533 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 UGT1A4P22310 534 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 ADRA1DP25100 572 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 AKT1P31749 480 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 UGT1A3P35503 534 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 UGT1A5P35504 534 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 ACTR1BP42025 376 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 ZNF140P52738 457 aaPredicted RBP13.61□□□□□ -0.23
USF1-205ENST00000473969 ACTR1AP61163 376 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 ETF1P62495 437 aaKnown RBP13.61□□□□□ -0.23
USF1-205ENST00000473969 E2F1Q01094 437 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 CTBSQ01459 385 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 PTPRCAPQ14761 206 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 KCTD16Q68DU8 428 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 SLC30A9Q6PML9 568 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 NYAP1Q6ZVC0 841 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 NLRP9Q7RTR0 991 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 ADGRG6Q86SQ4 1221 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 SLCO6A1Q86UG4 719 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 ARL10Q8N8L6 244 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 PPHLN1Q8NEY8 458 aaKnown RBP13.61□□□□□ -0.23
USF1-205ENST00000473969 OR6C4Q8NGE1 309 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 OR13C4Q8NGS5 318 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 ADAMTS14Q8WXS8 1223 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 NAT6Q93015 286 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 ULK4Q96C45 1275 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 DCUN1D1Q96GG9 259 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 BOCQ9BWV1 1114 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 ABCG4Q9H172 646 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 UGT1A7Q9HAW7 530 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 UGT1A10Q9HAW8 530 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 UGT1A8Q9HAW9 530 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 CASS4Q9NQ75 786 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 NLE1Q9NVX2 485 aaPredicted RBP13.61□□□□□ -0.23
USF1-205ENST00000473969 CRLS1Q9UJA2 301 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 PADI4Q9UM07 663 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 LAMA1P25391 3075 aa13.61□□□□□ -0.23
USF1-205ENST00000473969 DMXL1Q9Y485 3027 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.6□□□□□ -0.23
USF1-205ENST00000473969 MED19A0JLT2 244 aaPredicted RBP13.6□□□□□ -0.23
USF1-205ENST00000473969 B4DGG1 531 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 KMOO15229 486 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 LDB2O43679 373 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 DNAJC6O75061 913 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 MTX2O75431 263 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 FUCA1P04066 466 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 ZNF8P17098 575 aaPredicted RBP13.6□□□□□ -0.23
USF1-205ENST00000473969 VCLP18206 1134 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 TPSB2P20231 275 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 AK4P27144 223 aaPredicted RBP13.6□□□□□ -0.23
USF1-205ENST00000473969 NPY2RP49146 381 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 ACADVLP49748 655 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 SESN2P58004 480 aaPredicted RBP13.6□□□□□ -0.23
USF1-205ENST00000473969 TMEM115Q12893 351 aaPredicted RBP13.6□□□□□ -0.23
USF1-205ENST00000473969 MSLNQ13421 630 aaPredicted RBP13.6□□□□□ -0.23
USF1-205ENST00000473969 NFATC2Q13469 925 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 TPSAB1Q15661 275 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 ZRANB3Q5FWF4 1079 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 CERCAMQ5T4B2 595 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 ZNF648Q5T619 568 aaPredicted RBP13.6□□□□□ -0.23
USF1-205ENST00000473969 CRTC3Q6UUV7 619 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 SYT10Q6XYQ8 523 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 TAS2R42Q7RTR8 314 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 SNX20Q7Z614 316 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 LRRTM4Q86VH4 590 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 GALNT15Q8N3T1 639 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 CHCHD4Q8N4Q1 142 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 CCL4L1Q8NHW4 92 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 IFI44Q8TCB0 444 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 ZDHHC1Q8WTX9 485 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 HEXDCQ8WVB3 486 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.6□□□□□ -0.23
USF1-205ENST00000473969 DNAJC1Q96KC8 554 aaKnown RBP13.6□□□□□ -0.23
USF1-205ENST00000473969 TTC1Q99614 292 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 DDX47Q9H0S4 455 aaKnown RBP13.6□□□□□ -0.23
USF1-205ENST00000473969 TAAR2Q9P1P5 351 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 ASIC3Q9UHC3 531 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 ANGPTL2Q9UKU9 493 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 PRKAB1Q9Y478 270 aa13.6□□□□□ -0.23
USF1-205ENST00000473969 TDRD6O60522 2096 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms