RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 MRGPRDQ8TDS7 321 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 ARHGEF26Q96DR7 871 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 MYD88Q99836 296 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 PKP2Q99959 881 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 SARGQ9BW04 601 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 BICC1Q9H694 974 aaKnown RBP1.72□□□□□ -2.13
CCDC39-203ENST00000473854 ATAD3AQ9NVI7 634 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 NLKQ9UBE8 527 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.72□□□□□ -2.13
CCDC39-203ENST00000473854 CNPY2Q9Y2B0 182 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 NTNG1Q9Y2I2 539 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 PAPPAQ13219 1627 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 OVOS2A0A0J9YW53 1432 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 OVOS2Q6IE36 1432 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 A0A1B0GUL6 1792 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 UBR2Q8IWV8 1755 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 MED1Q15648 1581 aaPredicted RBP1.72□□□□□ -2.13
CCDC39-203ENST00000473854 INSRP06213 1382 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 METP08581 1390 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 MYH3P11055 1940 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 MYH7P12883 1935 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 ABCC11Q96J66 1382 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 TMEM2Q9UHN6 1383 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 PLEKHG1Q9ULL1 1385 aa1.72□□□□□ -2.13
CCDC39-203ENST00000473854 PLCH1Q4KWH8 1693 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 SPEF2Q9C093 1822 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 C17orf100A8MU93 164 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 FAM157CP0CG43 387 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 LYL1P12980 280 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 CEACAM1P13688 526 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 MYOD1P15172 320 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 DDX5P17844 614 aaKnown RBP1.71□□□□□ -2.14
CCDC39-203ENST00000473854 AVPR2P30518 371 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 MAP2K2P36507 400 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 NR2C2P49116 596 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 PGFP49763 221 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 TRA2BP62995 288 aaKnown RBP1.71□□□□□ -2.14
CCDC39-203ENST00000473854 RPP30P78346 268 aaKnown RBP1.71□□□□□ -2.14
CCDC39-203ENST00000473854 KCNJ10P78508 379 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 TMF1P82094 1093 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 PDE1BQ01064 536 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 LRMPQ12912 555 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 RAPSNQ13702 412 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 DCTN1Q14203 1278 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 IL13RA2Q14627 380 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 GPATCH4Q5T3I0 446 aaKnown RBP1.71□□□□□ -2.14
CCDC39-203ENST00000473854 DGAT2L7PQ6IED9 249 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 TTI2Q6NXR4 508 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 B3GNT6Q6ZMB0 384 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 Q6ZVH6 145 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 RAB11FIP2Q7L804 512 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 CCAR1Q8IX12 1150 aaKnown RBP1.71□□□□□ -2.14
CCDC39-203ENST00000473854 OR2C3Q8N628 320 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 AGBL3Q8NEM8 1001 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 FCAMRQ8WWV6 532 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 ERGIC1Q969X5 290 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 KIAA1191Q96A73 305 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 GMPPAQ96IJ6 420 aaPredicted RBP1.71□□□□□ -2.14
CCDC39-203ENST00000473854 MPHOSPH8Q99549 860 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 PIGQQ9BRB3 760 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 STK33Q9BYT3 514 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 PANK3Q9H999 370 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 THAP1Q9NVV9 213 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 NDUFAF4Q9P032 175 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 CELA1Q9UNI1 258 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 RCE1Q9Y256 329 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 ANKRD36CQ5JPF3 1778 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 ARFGEF2Q9Y6D5 1785 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 CPSF1Q10570 1443 aaKnown RBP1.71□□□□□ -2.14
CCDC39-203ENST00000473854 FAM135BQ49AJ0 1406 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 TCHHQ07283 1943 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 CHD4Q14839 1912 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 TJP1Q07157 1748 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 NUP188Q5SRE5 1749 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 NRAPQ86VF7 1730 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 MYO5AQ9Y4I1 1855 aaKnown RBP1.71□□□□□ -2.14
CCDC39-203ENST00000473854 NSD2O96028 1365 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 SLIT3O75094 1523 aa1.71□□□□□ -2.14
CCDC39-203ENST00000473854 RNF123Q5XPI4 1314 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 RPGRIP1LQ68CZ1 1315 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 COL16A1Q07092 1604 aaPredicted RBP1.7□□□□□ -2.14
CCDC39-203ENST00000473854 C1orf226A1L170 272 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 CTAGE9A4FU28 777 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 AQP12BA6NM10 295 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 ZNHIT1O43257 154 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 CEP104O60308 925 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 FRMD6-AS1P0C7T7 363 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 CTAGE8P0CG41 777 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 CHN1P15882 459 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 SRD5A1P18405 259 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 PPP2R1AP30153 589 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 HNRNPA3P51991 378 aaKnown RBP1.7□□□□□ -2.14
CCDC39-203ENST00000473854 MVDP53602 400 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 GOLGA8FQ08AF8 430 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 RALBP1Q15311 655 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 RPS6KA2Q15349 733 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 LONRF1Q17RB8 773 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 LRRC24Q50LG9 513 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 ESCO2Q56NI9 601 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 CES5AQ6NT32 575 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms