RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 SETMARQ53H47 684 aaPredicted RBP17.28■□□□□ 0.36
RRP1-202ENST00000471909 BORAQ6PGQ7 559 aa17.28■□□□□ 0.36
RRP1-202ENST00000471909 CUZD1Q86UP6 607 aa17.28■□□□□ 0.36
RRP1-202ENST00000471909 EFHBQ8N7U6 833 aa17.28■□□□□ 0.36
RRP1-202ENST00000471909 YME1L1Q96TA2 773 aa17.28■□□□□ 0.36
RRP1-202ENST00000471909 PKP2Q99959 881 aa17.28■□□□□ 0.36
RRP1-202ENST00000471909 FIS1Q9Y3D6 152 aa17.28■□□□□ 0.36
RRP1-202ENST00000471909 SDHDO14521 159 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 TGM5O43548 720 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 TIMP1P01033 207 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 CNPP09543 421 aaKnown RBP17.27■□□□□ 0.36
RRP1-202ENST00000471909 ENO3P13929 434 aaPredicted RBP17.27■□□□□ 0.36
RRP1-202ENST00000471909 GABRR2P28476 465 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 FMO4P31512 558 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 PPARGP37231 505 aaPredicted RBP17.27■□□□□ 0.36
RRP1-202ENST00000471909 PDAP1Q13442 181 aaKnown RBP17.27■□□□□ 0.36
RRP1-202ENST00000471909 CDH18Q13634 790 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 ADRM1Q16186 407 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 ZNF678Q5SXM1 525 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 ATXN7L2Q5T6C5 722 aaPredicted RBP17.27■□□□□ 0.36
RRP1-202ENST00000471909 PIANPQ8IYJ0 282 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 PGAM4Q8N0Y7 254 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 USP13Q92995 863 aaPredicted RBP17.27■□□□□ 0.36
RRP1-202ENST00000471909 MARK4Q96L34 752 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 EML4Q9HC35 981 aaKnown RBP17.27■□□□□ 0.36
RRP1-202ENST00000471909 RHBDL2Q9NX52 303 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 DNMT3BQ9UBC3 853 aaKnown RBP17.27■□□□□ 0.36
RRP1-202ENST00000471909 TRPC5OSA6NMA1 111 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 K7ERQ8 282 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 UBFD1O14562 309 aaKnown RBP17.27■□□□□ 0.36
RRP1-202ENST00000471909 ME2P23368 584 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 CA8P35219 290 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 RHOAP61586 193 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 CDKL1Q00532 357 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 CEACAM7Q14002 265 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 OR4D1Q15615 310 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 PAOXQ6QHF9 649 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 FAM217AQ8IXS0 508 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 RNF148Q8N7C7 305 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 MIPOL1Q8TD10 442 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 L3HYPDHQ96EM0 354 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 BPIFA1Q9NP55 256 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.27■□□□□ 0.361e-7■■■□□ 14.7
RRP1-202ENST00000471909 FKBPLQ9UIM3 349 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 MAFFQ9ULX9 164 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 PADI4Q9UM07 663 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 FAM50BQ9Y247 325 aa17.27■□□□□ 0.36
RRP1-202ENST00000471909 PLXNA4Q9HCM2 1894 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 TYW5A2RUC4 315 aaKnown RBP17.26■□□□□ 0.35
RRP1-202ENST00000471909 NRG2O14511 850 aaPredicted RBP17.26■□□□□ 0.35
RRP1-202ENST00000471909 SLC22A2O15244 555 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 NFKB2Q00653 900 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 MS4A2Q01362 244 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 GALNT1Q10472 559 aaPredicted RBP17.26■□□□□ 0.35
RRP1-202ENST00000471909 DCTN2Q13561 401 aaKnown RBP17.26■□□□□ 0.35
RRP1-202ENST00000471909 FAM219BQ5XKK7 198 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 PSAPL1Q6NUJ1 521 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 HS6ST3Q8IZP7 471 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 TTC30BQ8N4P2 665 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 CEP70Q8NHQ1 597 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 EXT2Q93063 718 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 TCF12Q99081 682 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 BEGAINQ9BUH8 593 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 WDR41Q9HAD4 459 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 A0A0J9YVX5 310 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 PRSS51A0A1B0GVH4 220 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 FZD6O60353 706 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 NDUFS3O75489 264 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 TRMUO75648 421 aaKnown RBP17.26■□□□□ 0.35
RRP1-202ENST00000471909 FGF18O76093 207 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 SRP72O76094 671 aaKnown RBP17.26■□□□□ 0.35
RRP1-202ENST00000471909 RHOBTB1O94844 696 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 SUPT7LO94864 414 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 PCSK6P29122 969 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 SLC5A2P31639 672 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 MC4RP32245 332 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 ATXN3P54252 364 aaPredicted RBP17.26■□□□□ 0.35
RRP1-202ENST00000471909 C1QTNF8P60827 252 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 ART3Q13508 389 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 UNC50Q53HI1 259 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 PAQR3Q6TCH7 311 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 AMIGO2Q86SJ2 522 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 APCDD1Q8J025 514 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 BIRC8Q96P09 236 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 ZBP1Q9H171 429 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 PCDHB9Q9Y5E1 797 aa17.26■□□□□ 0.35
RRP1-202ENST00000471909 BCAS2O75934 225 aaPredicted RBP17.25■□□□□ 0.35
RRP1-202ENST00000471909 MTHFD2P13995 350 aa17.25■□□□□ 0.35
RRP1-202ENST00000471909 TSPAN8P19075 237 aa17.25■□□□□ 0.35
RRP1-202ENST00000471909 PPM1AP35813 382 aa17.25■□□□□ 0.35
RRP1-202ENST00000471909 HERVK_113P63132 956 aa17.25■□□□□ 0.35
RRP1-202ENST00000471909 CREB5Q02930 508 aa17.25■□□□□ 0.35
RRP1-202ENST00000471909 DCAF4L2Q8NA75 395 aa17.25■□□□□ 0.35
RRP1-202ENST00000471909 GAB3Q8WWW8 586 aa17.25■□□□□ 0.35
RRP1-202ENST00000471909 PAWRQ96IZ0 340 aaKnown RBP17.25■□□□□ 0.35
RRP1-202ENST00000471909 ERVK-6Q9BXR3 956 aa17.25■□□□□ 0.35
RRP1-202ENST00000471909 LRRC3Q9BY71 257 aa17.25■□□□□ 0.35
RRP1-202ENST00000471909 TAS2R13Q9NYV9 303 aa17.25■□□□□ 0.35
RRP1-202ENST00000471909 FNDC3AQ9Y2H6 1198 aaKnown RBP17.25■□□□□ 0.35
RRP1-202ENST00000471909 COPG1Q9Y678 874 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms