RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 KCNK15Q9H427 330 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 LMAN1LQ9HAT1 526 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 CWC15Q9P013 229 aaKnown RBP6.11□□□□□ -1.43
NF1-208ENST00000471572 SEMA5BQ9P283 1151 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 CEPT1Q9Y6K0 416 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 DHX29Q7Z478 1369 aaKnown RBP6.11□□□□□ -1.43
NF1-208ENST00000471572 C9orf118A6NHY6 69 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 YDJCA8MPS7 323 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 PPP6CO00743 305 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 TTI1O43156 1089 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 B4GALT4O60513 344 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 MED24O75448 989 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 GNAZP19086 355 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 KLRC2P26717 231 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 CDC25CP30307 473 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 TIA1P31483 386 aaKnown RBP eCLIP6.11□□□□□ -1.43
NF1-208ENST00000471572 SERPINB6P35237 376 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 SOAT1P35610 550 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 PITPNBP48739 271 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 C21orf58P58505 322 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 ACTR1AP61163 376 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 MTA1Q13330 715 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 PTPRCAPQ14761 206 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 KARSQ15046 597 aaKnown RBP6.11□□□□□ -1.43
NF1-208ENST00000471572 PRAMEF8Q5VWM4 474 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 SP5Q6BEB4 398 aaPredicted RBP6.11□□□□□ -1.43
NF1-208ENST00000471572 BRAT1Q6PJG6 821 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 TRAPPC11Q7Z392 1133 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 TRIM74Q86UV6 250 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 TRIM73Q86UV7 250 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 RNF139Q8WU17 664 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 SPACA9Q96E40 222 aaPredicted RBP6.11□□□□□ -1.43
NF1-208ENST00000471572 EGLN2Q96KS0 407 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 CFAP53Q96M91 514 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 LRRC3BQ96PB8 259 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 LRRC37BQ96QE4 947 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 COQ10BQ9H8M1 238 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 ASNSD1Q9NWL6 643 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 CARD8Q9Y2G2 431 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 CLIC4Q9Y696 253 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 MYOM3Q5VTT5 1437 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 SUPT6HQ7KZ85 1726 aaKnown RBP6.11□□□□□ -1.43
NF1-208ENST00000471572 CDC42BPBQ9Y5S2 1711 aa6.11□□□□□ -1.43
NF1-208ENST00000471572 A0A1B0GTL3 188 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 MARCH11A6NNE9 402 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 TJP3O95049 919 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 C8orf89P0DMQ9 161 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 LBPP18428 481 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 SFNP31947 248 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 C6orf141Q5SZD1 244 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 KIRREL2Q6UWL6 708 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 ZBTB49Q6ZSB9 765 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 C11orf57Q6ZUT1 292 aaPredicted RBP6.1□□□□□ -1.43
NF1-208ENST00000471572 ARMCX2Q7L311 632 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 TLK2Q86UE8 772 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 D2HGDHQ8N465 521 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 TRPC4APQ8TEL6 797 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 FKBP10Q96AY3 582 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 RRNAD1Q96FB5 475 aaKnown RBP6.1□□□□□ -1.43
NF1-208ENST00000471572 PKP2Q99959 881 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 TMEM47Q9BQJ4 181 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 CCSER1Q9C0I3 900 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 RWDD1Q9H446 243 aaPredicted RBP6.1□□□□□ -1.43
NF1-208ENST00000471572 MINDY3Q9H8M7 445 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 PNPLA3Q9NST1 481 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 TRMT6Q9UJA5 497 aaKnown RBP6.1□□□□□ -1.43
NF1-208ENST00000471572 AMFRQ9UKV5 643 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 YEATS2Q9ULM3 1422 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 MAP3K2Q9Y2U5 619 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 KIF3AQ9Y496 699 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 CDC42BPAQ5VT25 1732 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 SAMD9LQ8IVG5 1584 aa6.1□□□□□ -1.43
NF1-208ENST00000471572 GPR89AB7ZAQ6 455 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 IKBKBO14920 756 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 PEX10O60683 326 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 GPC4O75487 556 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 DAB1O75553 588 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 RPS6KA4O75676 772 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 LCATP04180 440 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 LINGO3P0C6S8 592 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 GPR89BP0CG08 455 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 TSPY4P0CV99 314 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 TSPY10P0CW01 314 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 TGM2P21980 687 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 PCSK6P29122 969 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 CXCR3P49682 368 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 ARSEP51690 589 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 VAV2P52735 878 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 GAMTQ14353 236 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 CEBPEQ15744 281 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 USP39Q53GS9 565 aaKnown RBP6.09□□□□□ -1.43
NF1-208ENST00000471572 BOLA3Q53S33 107 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 RNASEH2BQ5TBB1 312 aaKnown RBP6.09□□□□□ -1.43
NF1-208ENST00000471572 Q6ZWC4 215 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 ZNF551Q7Z340 670 aaPredicted RBP6.09□□□□□ -1.43
NF1-208ENST00000471572 CCDC83Q8IWF9 413 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 MAML2Q8IZL2 1156 aaPredicted RBP6.09□□□□□ -1.43
NF1-208ENST00000471572 B3GALNT2Q8NCR0 500 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 HUS1BQ8NHY5 278 aa6.09□□□□□ -1.43
NF1-208ENST00000471572 ADAMTS17Q8TE56 1095 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms