RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-209	ENST00000470247	GLYATL1	Q969I3	302 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	SPACA7	Q96KW9	195 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	ZIM3	Q96PE6	472 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	TCF12	Q99081	682 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	MYOC	Q99972	504 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	FAM167B	Q9BTA0	163 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	TMEM109	Q9BVC6	243 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	LGR4	Q9BXB1	951 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	TEX101	Q9BY14	249 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	PPAN	Q9NQ55	473 aa	Known RBP	11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	ZSCAN32	Q9NX65	697 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	EURL	Q9NYK6	297 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	FETUB	Q9UGM5	382 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	DMTF1	Q9Y222	760 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	PLAA	Q9Y263	795 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	OAS3	Q9Y6K5	1087 aa	Known RBP	11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	PRSS21	Q9Y6M0	314 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	KNL1	Q8NG31	2342 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	KMT2E	Q8IZD2	1858 aa		11.16	□□□□□ -0.62
SREBF1-209	ENST00000470247	PLXNB3	Q9ULL4	1909 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	CACNA1H	O95180	2353 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247		H0Y8X5	98 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	AGPS	O00116	658 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	DYNC1I1	O14576	645 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	INPP4B	O15327	924 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	GALR2	O43603	387 aa	Predicted RBP	11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	SGTA	O43765	313 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	SASH3	O75995	380 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	HOXC4	P09017	264 aa	Predicted RBP	11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	CD27	P26842	260 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	MAOB	P27338	520 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	NUDT1	P36639	197 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	PTGER3	P43115	390 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	NUBP1	P53384	320 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	PFN3	P60673	137 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	NAB1	Q13506	487 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	PLK5	Q496M5	336 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	TPRG1L	Q5T0D9	272 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	RAET1G	Q6H3X3	334 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	MRNIP	Q6NTE8	343 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	ZNF549	Q6P9A3	640 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	ADGRD1	Q6QNK2	874 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	PACS1	Q6VY07	963 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	CERS6	Q6ZMG9	384 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	ABI3BP	Q7Z7G0	1075 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	SLC26A11	Q86WA9	606 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	HEATR4	Q86WZ0	1026 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	LRRC6	Q86X45	466 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	CTAGE3P	Q8IX95	158 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	DDHD1	Q8NEL9	900 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	ACVR1C	Q8NER5	493 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	DCAKD	Q8WVC6	231 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	LPGAT1	Q92604	370 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	CDKL2	Q92772	493 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	ULK4	Q96C45	1275 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	BIRC8	Q96P09	236 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	PAFAH2	Q99487	392 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	CPNE1	Q99829	537 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	LRFN3	Q9BTN0	628 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	APOO	Q9BUR5	198 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	BOC	Q9BWV1	1114 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	C1QTNF7	Q9BXJ2	289 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	FBXO6	Q9NRD1	293 aa	Predicted RBP	11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	GPR27	Q9NS67	375 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	ZDHHC3	Q9NYG2	299 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	ZFAT	Q9P243	1243 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	EIF2B4	Q9UI10	523 aa	Known RBP	11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	CRLS1	Q9UJA2	301 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	OR1A2	Q9Y585	309 aa		11.15	□□□□□ -0.62
SREBF1-209	ENST00000470247	EXOC1L	A0A1B0GW35	172 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247		A0A1W2PR77	199 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	POC1B-GALNT4	F8VUJ3	575 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	PRAMEF26	H0Y7S4	382 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	MAP3K13	O43283	966 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	MTX2	O75431	263 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	SLC25A14	O95258	325 aa	Predicted RBP	11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	FUCA1	P04066	466 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	WNT1	P04628	370 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	PYGL	P06737	847 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	AKT2	P31751	481 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	GP5	P40197	560 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	ABCG1	P45844	678 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	TTPA	P49638	278 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	CSE1L	P55060	971 aa	Known RBP	11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	ADAR	P55265	1226 aa	Known RBP	11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	TIAL1	Q01085	375 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	ZNF844	Q08AG5	666 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	PDE1C	Q14123	709 aa	Predicted RBP	11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	ITIH4	Q14624	930 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	RASA2	Q15283	850 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	KLHL38	Q2WGJ6	581 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	CTSL3P	Q5NE16	218 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	PMS2CL	Q68D20	193 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	KCTD16	Q68DU8	428 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	LRIG3	Q6UXM1	1119 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	STRA8	Q7Z7C7	330 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	ADGRG6	Q86SQ4	1221 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	TRIM74	Q86UV6	250 aa		11.14	□□□□□ -0.63
SREBF1-209	ENST00000470247	ZC3HC1	Q86WB0	502 aa	Known RBP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms