RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 STK39Q9UEW8 545 aa3.84□□□□□ -1.79
BRCA2-202ENST00000470094 PADI3Q9ULW8 664 aa3.84□□□□□ -1.79
BRCA2-202ENST00000470094 OR2W1Q9Y3N9 320 aa3.84□□□□□ -1.79
BRCA2-202ENST00000470094 ZNF711Q9Y462 761 aa3.84□□□□□ -1.79
BRCA2-202ENST00000470094 RPS6KL1Q9Y6S9 549 aa3.84□□□□□ -1.79
BRCA2-202ENST00000470094 F5H0A9 414 aaPredicted RBP3.83□□□□□ -1.8
BRCA2-202ENST00000470094 WDR1O75083 606 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 EIF2S1P05198 315 aaKnown RBP3.83□□□□□ -1.8
BRCA2-202ENST00000470094 CLCN3P51790 818 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 TERF1P54274 439 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 DCAF7P61962 342 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 PITX1P78337 314 aaPredicted RBP3.83□□□□□ -1.8
BRCA2-202ENST00000470094 TFAP4Q01664 338 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 NIPAL4Q0D2K0 466 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 PDE1CQ14123 709 aaPredicted RBP3.83□□□□□ -1.8
BRCA2-202ENST00000470094 KCTD2Q14681 263 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 ADIPOQQ15848 244 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 PNLIPRP3Q17RR3 467 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 C18orf63Q68DL7 685 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 CFAP161Q6P656 301 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 C4orf50Q6ZRC1 276 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 SEPT14Q6ZU15 432 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 ASB18Q6ZVZ8 466 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 DSG4Q86SJ6 1040 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 SMIM29Q86T20 159 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 ZNF329Q86UD4 541 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 NRROSQ86YC3 692 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 DCUN1D3Q8IWE4 304 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 SPATA3Q8NHX4 192 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 SLC38A5Q8WUX1 472 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 ARHGEF2Q92974 986 aaKnown RBP3.83□□□□□ -1.8
BRCA2-202ENST00000470094 UHRF2Q96PU4 802 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 NEURL2Q9BR09 285 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 MMP28Q9H239 520 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 TBC1D22BQ9NU19 505 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 UBA2Q9UBT2 640 aaPredicted RBP3.83□□□□□ -1.8
BRCA2-202ENST00000470094 NRBP1Q9UHY1 535 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 ADAM18Q9Y3Q7 739 aa3.83□□□□□ -1.8
BRCA2-202ENST00000470094 TDRD9Q8NDG6 1382 aaKnown RBP3.82□□□□□ -1.8
BRCA2-202ENST00000470094 A0A087WYN8 130 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 A0A087X0M5 115 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 A0A1B0GX30 115 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 KANSL1LA0AUZ9 987 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 FAM172BPA6NC97 362 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 CAPN9O14815 690 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 ATP2A1O14983 1001 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 KCNN4O15554 427 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 ZNHIT1O43257 154 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 GRID2O43424 1007 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 HCRTR2O43614 444 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 TIMM44O43615 452 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 FGF17O60258 216 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 DDX58O95786 925 aaKnown RBP3.82□□□□□ -1.8
BRCA2-202ENST00000470094 CDH2P19022 906 aaPredicted RBP3.82□□□□□ -1.8
BRCA2-202ENST00000470094 APOBEC1P41238 236 aaKnown RBP3.82□□□□□ -1.8
BRCA2-202ENST00000470094 PIK3CAP42336 1068 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 AMPHP49418 695 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 IRX6P78412 446 aaPredicted RBP3.82□□□□□ -1.8
BRCA2-202ENST00000470094 PHEXP78562 749 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 MRPS34P82930 218 aaKnown RBP3.82□□□□□ -1.8
BRCA2-202ENST00000470094 LRMPQ12912 555 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 CDC16Q13042 620 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 PRKG2Q13237 762 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 RBBP5Q15291 538 aaKnown RBP3.82□□□□□ -1.8
BRCA2-202ENST00000470094 MED22Q15528 200 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 NAB2Q15742 525 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 ZNF628Q5EBL2 1059 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 NCEH1Q6PIU2 408 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 PAPD4Q6PIY7 484 aaKnown RBP3.82□□□□□ -1.8
BRCA2-202ENST00000470094 ZNF704Q6ZNC4 412 aaPredicted RBP3.82□□□□□ -1.8
BRCA2-202ENST00000470094 USP43Q70EL4 1123 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 PXKQ7Z7A4 578 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 MAP7D3Q8IWC1 876 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 RNF168Q8IYW5 571 aaPredicted RBP3.82□□□□□ -1.8
BRCA2-202ENST00000470094 ADSSL1Q8N142 457 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 DMBX1Q8NFW5 382 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 OR1J2Q8NGS2 313 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 OR5R1Q8NH85 324 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 SEPT5Q99719 369 aaPredicted RBP3.82□□□□□ -1.8
BRCA2-202ENST00000470094 LRRC1Q9BTT6 524 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 PIGMQ9H3S5 423 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 PDZD7Q9H5P4 517 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 COPG2Q9UBF2 871 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 FBXW11Q9UKB1 542 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 MTMR6Q9Y217 621 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 DLGAP4Q9Y2H0 992 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 R3HDM2Q9Y2K5 976 aaKnown RBP3.82□□□□□ -1.8
BRCA2-202ENST00000470094 CLIC4Q9Y696 253 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 PIAS3Q9Y6X2 628 aa3.82□□□□□ -1.8
BRCA2-202ENST00000470094 LIPT2A6NK58 231 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 EIF4E1BA6NMX2 242 aaKnown RBP3.81□□□□□ -1.8
BRCA2-202ENST00000470094 FAM90A26D6RGX4 464 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 P2RY10O00398 339 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 DVL1O14640 695 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 ANKRD28O15084 1053 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 DAB1O75553 588 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 FAM106CPP0CH98 169 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 UGT1A1P22309 533 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 ARL3P36405 182 aa3.81□□□□□ -1.8
BRCA2-202ENST00000470094 DVL1P1P54792 670 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms