RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 TNIP2Q8NFZ5 429 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 NSMCE3Q96MG7 304 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 RETREG1Q9H6L5 497 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 CD320Q9NPF0 282 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 CIDEBQ9UHD4 219 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 ZNF639Q9UID6 485 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 RNF112Q9ULX5 631 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 AURKCQ9UQB9 309 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 BTRCQ9Y297 605 aa13.57□□□□□ -0.24
BRCA1-209ENST00000470026 GRXCR2A6NFK2 248 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 SUPT3HB4E1H0 165 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 C9JVG2 144 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 SYN3O14994 580 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 SUPT3HO75486 399 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 TSPAN12O95859 305 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 EOMESO95936 686 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 GNAO1P09471 354 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 ZDHHC11BP0C7U3 371 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 PRSS56P0CW18 603 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 UGT1A6P19224 532 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 RFC2P35250 354 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 RAD51Q06609 339 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 GEN1Q17RS7 908 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 TMTC4Q5T4D3 741 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 LPCAT2Q7L5N7 544 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 SYVN1Q86TM6 617 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 RTN4RL1Q86UN2 441 aaPredicted RBP13.56□□□□□ -0.24
BRCA1-209ENST00000470026 TTC9BQ8N6N2 239 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 FBXO32Q969P5 355 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 TEX37Q96LM6 180 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 TLR8Q9NR97 1041 aaKnown RBP13.56□□□□□ -0.24
BRCA1-209ENST00000470026 PCTPQ9UKL6 214 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 SPO11Q9Y5K1 396 aa13.56□□□□□ -0.24
BRCA1-209ENST00000470026 KANSL1LA0AUZ9 987 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 SLC12A8A0AV02 714 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 MLYCDO95822 493 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 NPPAP01160 153 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 PIRTP0C851 137 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 UROSP10746 265 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 CR2P20023 1033 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 TACR2P21452 398 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 CTGFP29279 349 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 APLP1P51693 650 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 PLOD1Q02809 727 aaPredicted RBP13.55□□□□□ -0.24
BRCA1-209ENST00000470026 RPS6KA2Q15349 733 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 TAF1AQ15573 450 aaPredicted RBP13.55□□□□□ -0.24
BRCA1-209ENST00000470026 TSNQ15631 228 aaKnown RBP13.55□□□□□ -0.24
BRCA1-209ENST00000470026 CLLU1OSQ5K130 101 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 VARS2Q5ST30 1063 aaKnown RBP13.55□□□□□ -0.24
BRCA1-209ENST00000470026 GLB1LQ6UWU2 654 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 MIB1Q86YT6 1006 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 TMEM199Q8N511 208 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 NKAPQ8N5F7 415 aaKnown RBP13.55□□□□□ -0.24
BRCA1-209ENST00000470026 DIS3LQ8TF46 1054 aaKnown RBP13.55□□□□□ -0.24
BRCA1-209ENST00000470026 SEPT8Q92599 483 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 PSKH2Q96QS6 385 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 ALG2Q9H553 416 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 ZFYVE28Q9HCC9 887 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 SEMA4BQ9NPR2 832 aaPredicted RBP13.55□□□□□ -0.24
BRCA1-209ENST00000470026 COMMD8Q9NX08 183 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 ZIM2Q9NZV7 527 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 ST14Q9Y5Y6 855 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 CDC7O00311 574 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 PRLP01236 227 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 HTR1EP28566 365 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 CDH15P55291 814 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 KCNK10P57789 538 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 ECT2LQ008S8 904 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 TAF10Q12962 218 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 NFYCQ13952 458 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 ZBED5Q49AG3 693 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 PAGE3Q5JUK9 113 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 C10orf120Q5SQS8 335 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 KIAA2013Q8IYS2 634 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 TBC1D21Q8IYX1 336 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 ATAD1Q8NBU5 361 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 ISG20Q96AZ6 181 aaKnown RBP13.55□□□□□ -0.24
BRCA1-209ENST00000470026 SPATA17Q96L03 361 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 MUC3BQ9H195 1237 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 MAGEH1Q9H213 219 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 SPC25Q9HBM1 224 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 LEF1Q9UJU2 399 aaPredicted RBP13.55□□□□□ -0.24
BRCA1-209ENST00000470026 OAZ3Q9UMX2 235 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 ARIH1Q9Y4X5 557 aaPredicted RBP13.55□□□□□ -0.24
BRCA1-209ENST00000470026 TIMM22Q9Y584 194 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 PCNTO95613 3336 aa13.55□□□□□ -0.24
BRCA1-209ENST00000470026 FAM149AA5PLN7 773 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 MANSC4A6NHS7 340 aaPredicted RBP13.54□□□□□ -0.24
BRCA1-209ENST00000470026 SOAT2O75908 522 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 PRDX3P30048 256 aaKnown RBP13.54□□□□□ -0.24
BRCA1-209ENST00000470026 FMO4P31512 558 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 ERVK-8P63133 956 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 FAM189BP81408 668 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 EMX2Q04743 252 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 LIPEQ05469 1076 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 DCTN2Q13561 401 aaKnown RBP13.54□□□□□ -0.24
BRCA1-209ENST00000470026 RABL3Q5HYI8 236 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 CCSAPQ6IQ19 270 aaPredicted RBP13.54□□□□□ -0.24
BRCA1-209ENST00000470026 PRR23BQ6ZRT6 265 aa13.54□□□□□ -0.24
BRCA1-209ENST00000470026 USP51Q70EK9 711 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms