RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 MUSKO15146 869 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 SEC24DO94855 1032 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 FGF1P05230 155 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 IDO1P14902 403 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 HLA-DPA1P20036 260 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 GRK4P32298 578 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 PBX3P40426 434 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 GALK1P51570 392 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 APLP1P51693 650 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 TNK2Q07912 1038 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 ILF2Q12905 390 aaKnown RBP15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 SERINC3Q13530 473 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 DCTN2Q13561 401 aaKnown RBP15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 RAET1EQ8TD07 263 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 CENPNQ96H22 339 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 MYRFLQ96LU7 910 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 RPRD1AQ96P16 312 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 GPBP1L1Q9HC44 474 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 PCDHB8Q9UN66 801 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 PCDHA9Q9Y5H5 950 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 TMEM221A6NGB7 291 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 RHOBTB1O94844 696 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 MTHFD1P11586 935 aaKnown RBP15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 MYF6P23409 242 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 PAX3P23760 479 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 OR1G1P47890 313 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 STC1P52823 247 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 LCP2Q13094 533 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 NFYCQ13952 458 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 ZNF235Q14590 738 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 KCTD21Q4G0X4 260 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 PAQR3Q6TCH7 311 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 STAG3L4Q8TBR4 150 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 BRSK1Q8TDC3 778 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 GPR152Q8TDT2 470 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 SLC35B4Q969S0 331 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 BTN2A3PQ96KV6 586 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 CAPNS2Q96L46 248 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 FBXO44Q9H4M3 255 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 SLC52A3Q9NQ40 469 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 OAZ3Q9UMX2 235 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 FAM50BQ9Y247 325 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 GPR45Q9Y5Y3 372 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 INPP4BO15327 924 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 OGNP20774 298 aaKnown RBP15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 FMO4P31512 558 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 SOX11P35716 441 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 ATP6AP1Q15904 470 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 CYP51A1Q16850 503 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 RABL3Q5HYI8 236 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 SLC24A5Q71RS6 500 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 GPR141Q7Z602 305 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 DCP1BQ8IZD4 617 aaKnown RBP15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 GOLM1Q8NBJ4 401 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 TRPV3Q8NET8 790 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 PEX13Q92968 403 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 KIAA1191Q96A73 305 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 TMEM125Q96AQ2 219 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 VPS33AQ96AX1 596 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 SYTL2Q9HCH5 934 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 IKZF3Q9UKT9 509 aa15.69■□□□□ 0.1
TSPAN4-211ENST00000468468 DOCK4Q8N1I0 1966 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 KERAO60938 352 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 VPS4BO75351 444 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 OR1E1P30953 314 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 CCT8P50990 548 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 ESRRGP62508 458 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 FOXM1Q08050 763 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 ANKS6Q68DC2 871 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 CYGBQ8WWM9 190 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 TUBA8Q9NY65 449 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 A0A1W2PQ45 241 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 A0A1W2PQY0 241 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 BAIAP3O94812 1187 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 CYBBP04839 570 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 GSK3BP49841 420 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 KCNK10P57789 538 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 PARP15Q460N3 678 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 SLC36A3Q495N2 470 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 FUT11Q495W5 492 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 COQ5Q5HYK3 327 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 CLVS1Q8IUQ0 354 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 TNIP2Q8NFZ5 429 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 CDKN2AIPNLQ96HQ2 116 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 TEX37Q96LM6 180 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 TRIM54Q9BYV2 358 aa15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 TDRKHQ9Y2W6 561 aaKnown RBP15.68■□□□□ 0.1
TSPAN4-211ENST00000468468 A0A1W2PP18 115 aa15.67■□□□□ 0.1
TSPAN4-211ENST00000468468 BOLA2-SMG1P6H3BVE0 249 aa15.67■□□□□ 0.1
TSPAN4-211ENST00000468468 ECI2O75521 394 aa15.67■□□□□ 0.1
TSPAN4-211ENST00000468468 GPIP06744 558 aa15.67■□□□□ 0.1
TSPAN4-211ENST00000468468 NCK1P16333 377 aa15.67■□□□□ 0.1
TSPAN4-211ENST00000468468 ZNF24P17028 368 aa15.67■□□□□ 0.1
TSPAN4-211ENST00000468468 EMP3P54852 163 aa15.67■□□□□ 0.1
TSPAN4-211ENST00000468468 DSC1Q08554 894 aa15.67■□□□□ 0.1
TSPAN4-211ENST00000468468 TSNQ15631 228 aaKnown RBP15.67■□□□□ 0.1
TSPAN4-211ENST00000468468 SPATA19Q7Z5L4 167 aa15.67■□□□□ 0.1
TSPAN4-211ENST00000468468 RNF168Q8IYW5 571 aaPredicted RBP15.67■□□□□ 0.1
TSPAN4-211ENST00000468468 RPL10LQ96L21 214 aaKnown RBP15.67■□□□□ 0.1
TSPAN4-211ENST00000468468 KCTD14Q9BQ13 255 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms