RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 CAPRIN2Q6IMN6 1127 aaKnown RBP13.49□□□□□ -0.25
RPP40-204ENST00000468105 C16orf46Q6P387 395 aa13.49□□□□□ -0.25
RPP40-204ENST00000468105 TMEM71Q6P5X7 295 aa13.49□□□□□ -0.25
RPP40-204ENST00000468105 BRAT1Q6PJG6 821 aa13.49□□□□□ -0.25
RPP40-204ENST00000468105 CPNE8Q86YQ8 564 aa13.49□□□□□ -0.25
RPP40-204ENST00000468105 NRSN1Q8IZ57 195 aa13.49□□□□□ -0.25
RPP40-204ENST00000468105 NLGN4XQ8N0W4 816 aa13.49□□□□□ -0.25
RPP40-204ENST00000468105 NLGN4YQ8NFZ3 816 aaPredicted RBP13.49□□□□□ -0.25
RPP40-204ENST00000468105 KIF18AQ8NI77 898 aa13.49□□□□□ -0.25
RPP40-204ENST00000468105 APOBEC4Q8WW27 367 aaKnown RBP13.49□□□□□ -0.25
RPP40-204ENST00000468105 STARD8Q92502 1023 aa13.49□□□□□ -0.25
RPP40-204ENST00000468105 CATSPER2Q96P56 530 aa13.49□□□□□ -0.25
RPP40-204ENST00000468105 GPATCH2LQ9NWQ4 482 aa13.49□□□□□ -0.25
RPP40-204ENST00000468105 DDX56Q9NY93 547 aaKnown RBP13.49□□□□□ -0.25
RPP40-204ENST00000468105 MED13Q9UHV7 2174 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 CES2O00748 559 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 FANCGO15287 622 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 CREB3O43889 395 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 ATP1A1P05023 1023 aaKnown RBP13.48□□□□□ -0.25
RPP40-204ENST00000468105 TCP1P17987 556 aaKnown RBP13.48□□□□□ -0.25
RPP40-204ENST00000468105 ETV3P41162 512 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 SSR1P43307 286 aaKnown RBP13.48□□□□□ -0.25
RPP40-204ENST00000468105 PAPOLAP51003 745 aaKnown RBP13.48□□□□□ -0.25
RPP40-204ENST00000468105 YBEYP58557 167 aaPredicted RBP13.48□□□□□ -0.25
RPP40-204ENST00000468105 CDK3Q00526 305 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 MC2RQ01718 297 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 KLRB1Q12918 225 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 ACOX1Q15067 660 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 CLPPQ16740 277 aaPredicted RBP13.48□□□□□ -0.25
RPP40-204ENST00000468105 CA9Q16790 459 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 DCAF12Q5T6F0 453 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 ZNF787Q6DD87 383 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 CYP4V2Q6ZWL3 525 aaPredicted RBP13.48□□□□□ -0.25
RPP40-204ENST00000468105 TRIM74Q86UV6 250 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 ARHGAP12Q8IWW6 846 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 KATNAL2Q8IYT4 538 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 PEBP4Q96S96 227 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 CARD9Q9H257 536 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 TRNAU1APQ9NX07 287 aaKnown RBP13.48□□□□□ -0.25
RPP40-204ENST00000468105 AKAP7Q9P0M2 348 aaPredicted RBP13.48□□□□□ -0.25
RPP40-204ENST00000468105 FZD10Q9ULW2 581 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 SNX12Q9UMY4 172 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 PACSIN2Q9UNF0 486 aaPredicted RBP13.48□□□□□ -0.25
RPP40-204ENST00000468105 SLC17A4Q9Y2C5 497 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 TMEM98Q9Y2Y6 226 aa13.48□□□□□ -0.25
RPP40-204ENST00000468105 TMEM184BQ9Y519 407 aaPredicted RBP13.48□□□□□ -0.25
RPP40-204ENST00000468105 A1L4Q6 167 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 DNAJB5O75953 348 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 STK17BO94768 372 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 RARAP10276 462 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 TCF4P15884 667 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 KELP23276 732 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 IL1R2P27930 398 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 CSNK1DP48730 415 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 ZNF135P52742 658 aaPredicted RBP13.47□□□□□ -0.25
RPP40-204ENST00000468105 RWDD2BP57060 319 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 TUBB2AQ13885 445 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 PARP15Q460N3 678 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.47□□□□□ -0.25
RPP40-204ENST00000468105 ERMARDQ5T6L9 678 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 DENND2CQ68D51 928 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 SCYL2Q6P3W7 929 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 TSPAN33Q86UF1 283 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 VSIG1Q86XK7 387 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 PGBD5Q8N414 524 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 NPWQ8N729 165 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 EXD1Q8NHP7 514 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 FAM71BQ8TC56 605 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 SLC37A2Q8TED4 501 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 KRT35Q92764 455 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 SCARF2Q96GP6 870 aaPredicted RBP13.47□□□□□ -0.25
RPP40-204ENST00000468105 PBKQ96KB5 322 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 TUBGCP5Q96RT8 1024 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 AGAP2Q99490 1192 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 SNRNP25Q9BV90 132 aaKnown RBP13.47□□□□□ -0.25
RPP40-204ENST00000468105 TUBB2BQ9BVA1 445 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 GSDMCQ9BYG8 508 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 ASPSCR1Q9BZE9 553 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 PCSK1NQ9UHG2 260 aa13.47□□□□□ -0.25
RPP40-204ENST00000468105 ZNF106Q9H2Y7 1883 aaKnown RBP13.46□□□□□ -0.25
RPP40-204ENST00000468105 DOPEY1Q5JWR5 2465 aa13.46□□□□□ -0.25
RPP40-204ENST00000468105 ZNF487B1APH4 448 aa13.46□□□□□ -0.25
RPP40-204ENST00000468105 MAP4P27816 1152 aaKnown RBP13.46□□□□□ -0.25
RPP40-204ENST00000468105 STAT5AP42229 794 aa13.46□□□□□ -0.25
RPP40-204ENST00000468105 MARCKSL1P49006 195 aa13.46□□□□□ -0.25
RPP40-204ENST00000468105 COPS2P61201 443 aa13.46□□□□□ -0.25
RPP40-204ENST00000468105 ILF3Q12906 894 aaKnown RBP eCLIP13.46□□□□□ -0.25
RPP40-204ENST00000468105 IHHQ14623 411 aa13.46□□□□□ -0.25
RPP40-204ENST00000468105 PDK2Q15119 407 aa13.46□□□□□ -0.25
RPP40-204ENST00000468105 DPYSL2Q16555 572 aa13.46□□□□□ -0.25
RPP40-204ENST00000468105 TXNRD3NBQ6F5E7 133 aa13.46□□□□□ -0.25
RPP40-204ENST00000468105 DOK6Q6PKX4 331 aa13.46□□□□□ -0.25
RPP40-204ENST00000468105 Q6ZVL8 140 aa13.46□□□□□ -0.25
RPP40-204ENST00000468105 RCOR2Q8IZ40 523 aa13.46□□□□□ -0.25
RPP40-204ENST00000468105 ALG3Q92685 438 aa13.46□□□□□ -0.25
RPP40-204ENST00000468105 NUS1Q96E22 293 aa13.46□□□□□ -0.25
RPP40-204ENST00000468105 RBM41Q96IZ5 413 aaKnown RBP13.46□□□□□ -0.25
RPP40-204ENST00000468105 OSBPL9Q96SU4 736 aa13.46□□□□□ -0.25
RPP40-204ENST00000468105 RUFY1Q96T51 708 aa13.46□□□□□ -0.25
RPP40-204ENST00000468105 TRIM55Q9BYV6 548 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms