RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 FAM110AQ9BQ89 295 aa3.96□□□□□ -1.78
CALD1-214ENST00000466704 TMEM47Q9BQJ4 181 aa3.96□□□□□ -1.78
CALD1-214ENST00000466704 HAUS8Q9BT25 410 aa3.96□□□□□ -1.78
CALD1-214ENST00000466704 IFIH1Q9BYX4 1025 aaKnown RBP3.96□□□□□ -1.78
CALD1-214ENST00000466704 USP44Q9H0E7 712 aa3.96□□□□□ -1.78
CALD1-214ENST00000466704 RANBP17Q9H2T7 1088 aaKnown RBP3.96□□□□□ -1.78
CALD1-214ENST00000466704 ESRP2Q9H6T0 727 aaKnown RBP3.96□□□□□ -1.78
CALD1-214ENST00000466704 GAREM1Q9H706 876 aa3.96□□□□□ -1.78
CALD1-214ENST00000466704 ASAH2Q9NR71 780 aa3.96□□□□□ -1.78
CALD1-214ENST00000466704 PLSCR4Q9NRQ2 329 aa3.96□□□□□ -1.78
CALD1-214ENST00000466704 INTS6Q9UL03 887 aaKnown RBP3.96□□□□□ -1.78
CALD1-214ENST00000466704 VDAC3Q9Y277 283 aa3.96□□□□□ -1.78
CALD1-214ENST00000466704 CEPT1Q9Y6K0 416 aa3.96□□□□□ -1.78
CALD1-214ENST00000466704 NSD2O96028 1365 aa3.96□□□□□ -1.78
CALD1-214ENST00000466704 COL5A2P05997 1499 aaPredicted RBP3.96□□□□□ -1.78
CALD1-214ENST00000466704 NRKQ7Z2Y5 1582 aa3.96□□□□□ -1.78
CALD1-214ENST00000466704 RGPD8O14715 1765 aaPredicted RBP3.96□□□□□ -1.78
CALD1-214ENST00000466704 CRB1P82279 1406 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 NUP188Q5SRE5 1749 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 PIK3C2AO00443 1686 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 MAGEA13PA6NCF6 341 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 SNRNP70P08621 437 aaKnown RBP3.95□□□□□ -1.78
CALD1-214ENST00000466704 MAOAP21397 527 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 RRM1P23921 792 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 CCR9P51686 369 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 RPL7AP62424 266 aaKnown RBP3.95□□□□□ -1.78
CALD1-214ENST00000466704 POU3F1Q03052 451 aaPredicted RBP3.95□□□□□ -1.78
CALD1-214ENST00000466704 GOLGA8DPQ0D2H9 430 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 DDX10Q13206 875 aaKnown RBP3.95□□□□□ -1.78
CALD1-214ENST00000466704 CCNG2Q16589 344 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 ALG11Q2TAA5 492 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 DPCR1Q3MIW9 517 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 SETMARQ53H47 684 aaPredicted RBP3.95□□□□□ -1.78
CALD1-214ENST00000466704 C6orf141Q5SZD1 244 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 KCTD18Q6PI47 426 aaPredicted RBP3.95□□□□□ -1.78
CALD1-214ENST00000466704 UNQ6126/PRO20091Q6UXV3 157 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 CCNI2Q6ZMN8 369 aaPredicted RBP3.95□□□□□ -1.78
CALD1-214ENST00000466704 HAPLN4Q86UW8 402 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 NR2C2APQ86WQ0 139 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 WDR63Q8IWG1 891 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 DIS3L2Q8IYB7 885 aaKnown RBP3.95□□□□□ -1.78
CALD1-214ENST00000466704 CCDC13Q8IYE1 715 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 SPATA6LQ8N4H0 392 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 ETNPPLQ8TBG4 499 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 RFFLQ8WZ73 363 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 TANKQ92844 425 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 TMEM19Q96HH6 336 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 SLC41A2Q96JW4 573 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 UNC45AQ9H3U1 944 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 PPP1R3EQ9H7J1 279 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 DDX31Q9H8H2 851 aaKnown RBP3.95□□□□□ -1.78
CALD1-214ENST00000466704 ZNF224Q9NZL3 707 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 POLKQ9UBT6 870 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 SIX4Q9UIU6 781 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 CAPN7Q9Y6W3 813 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 SHANK3Q9BYB0 1731 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 NFAT5O94916 1531 aa3.95□□□□□ -1.78
CALD1-214ENST00000466704 TRIP12Q14669 1992 aaPredicted RBP3.94□□□□□ -1.78
CALD1-214ENST00000466704 GLI3P10071 1580 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 CKAP5Q14008 2032 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 RTL1A6NKG5 1358 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 INSRP06213 1382 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 FLT4P35916 1363 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 KIF24Q5T7B8 1368 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 NPC1L1Q9UHC9 1359 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 A0A0G2JPF8 293 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 NPIPB15A6NHN6 443 aaPredicted RBP3.94□□□□□ -1.78
CALD1-214ENST00000466704 HNRNPCL2B2RXH8 293 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 HNRNPCL3B7ZW38 293 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 HNRNPCL1O60812 293 aaKnown RBP3.94□□□□□ -1.78
CALD1-214ENST00000466704 RFPL2O75678 378 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 HNRNPCL4P0DMR1 293 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 IL7RP16871 459 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 DDIT3P35638 169 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 PIP4K2AP48426 406 aaPredicted RBP3.94□□□□□ -1.78
CALD1-214ENST00000466704 SEC61BP60468 96 aaKnown RBP3.94□□□□□ -1.78
CALD1-214ENST00000466704 ERVFC1-1P60608 527 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 TMEM115Q12893 351 aaPredicted RBP3.94□□□□□ -1.78
CALD1-214ENST00000466704 ZNF155Q12901 538 aaPredicted RBP3.94□□□□□ -1.78
CALD1-214ENST00000466704 OLIG2Q13516 323 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 DCTN2Q13561 401 aaKnown RBP3.94□□□□□ -1.78
CALD1-214ENST00000466704 FRG1Q14331 258 aaKnown RBP3.94□□□□□ -1.78
CALD1-214ENST00000466704 TSTQ16762 297 aaKnown RBP3.94□□□□□ -1.78
CALD1-214ENST00000466704 USP41Q3LFD5 358 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 HIST2H2BCQ6DN03 193 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 HIST2H2BDQ6DRA6 164 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 RGMBQ6NW40 437 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 DLK2Q6UY11 383 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 CPLX4Q7Z7G2 160 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 SFR1Q86XK3 245 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 NEK9Q8TD19 979 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 MAGEC3Q8TD91 643 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 KCNG4Q8TDN1 519 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 WFIKKN2Q8TEU8 576 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 PSPC1Q8WXF1 523 aaKnown RBP3.94□□□□□ -1.78
CALD1-214ENST00000466704 FAM149B1Q96BN6 582 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 INTS12Q96CB8 462 aaKnown RBP3.94□□□□□ -1.78
CALD1-214ENST00000466704 HARBI1Q96MB7 349 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 IL17FQ96PD4 163 aa3.94□□□□□ -1.78
CALD1-214ENST00000466704 SH3GL2Q99962 352 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms