RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 TCEAL2Q9H3H9 227 aaPredicted RBP14.33□□□□□ -0.12
DNMT3A-208ENST00000466601 SUDS3Q9H7L9 328 aaPredicted RBP14.33□□□□□ -0.12
DNMT3A-208ENST00000466601 MRM3Q9HC36 420 aaKnown RBP14.33□□□□□ -0.12
DNMT3A-208ENST00000466601 TRIM39Q9HCM9 518 aa14.33□□□□□ -0.12
DNMT3A-208ENST00000466601 CYP4F12Q9HCS2 524 aa14.33□□□□□ -0.12
DNMT3A-208ENST00000466601 ARFGAP3Q9NP61 516 aa14.33□□□□□ -0.12
DNMT3A-208ENST00000466601 APOBEC3BQ9UH17 382 aaKnown RBP14.33□□□□□ -0.12
DNMT3A-208ENST00000466601 SOX13Q9UN79 622 aa14.33□□□□□ -0.12
DNMT3A-208ENST00000466601 DGKBQ9Y6T7 804 aa14.33□□□□□ -0.12
DNMT3A-208ENST00000466601 KNL1Q8NG31 2342 aa14.33□□□□□ -0.12
DNMT3A-208ENST00000466601 FRYLO94915 3013 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 MAGEB16A2A368 324 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 SCAMP1O15126 338 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 FUCA1P04066 466 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 IVLP07476 585 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 CD59P13987 128 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 ITGALP20701 1170 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 DGKAP23743 735 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 NMBRP28336 390 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 CA5AP35218 305 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 SLC7A5Q01650 507 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 ACVR1Q04771 509 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 CALCOCO2Q13137 446 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 NFATC2Q13469 925 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 ZRANB3Q5FWF4 1079 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 LDLRAP1Q5SW96 308 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 ZNF648Q5T619 568 aaPredicted RBP14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 CASC4Q6P4E1 433 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 DBX2Q6ZNG2 339 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 MARK2Q7KZI7 788 aaKnown RBP14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 SNX20Q7Z614 316 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 ADGRG6Q86SQ4 1221 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 GATAD2AQ86YP4 633 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 NOA1Q8NC60 698 aaKnown RBP14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 LMX1AQ8TE12 382 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 HDAC10Q969S8 669 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 FAM96AQ9H5X1 160 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 CARS2Q9HA77 564 aaKnown RBP14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 TREX1Q9NSU2 369 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 SMOXQ9NWM0 555 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 SAMD15Q9P1V8 674 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 WHRNQ9P202 907 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 VPS18Q9P253 973 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 ATXN10Q9UBB4 475 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 SPASTQ9UBP0 616 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 CRLS1Q9UJA2 301 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 SUFUQ9UMX1 484 aa14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 PTPRZ1P23471 2315 aaPredicted RBP14.32□□□□□ -0.12
DNMT3A-208ENST00000466601 CCDC162PA2VCL2 907 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 AGAP14A8MT82 685 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 TP73O15350 636 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 MTX2O75431 263 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 GOT2P00505 430 aaKnown RBP14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 CTSEP14091 401 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 GNPDA1P46926 289 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 PRAMEP78395 509 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 CACNG1Q06432 222 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 C1orf61Q13536 156 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 GPR33Q49SQ1 333 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 KHDC1Q4VXA5 237 aaKnown RBP14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 DNAJC21Q5F1R6 531 aaKnown RBP14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 PRRT3Q5FWE3 981 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 FNBP1LQ5T0N5 605 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 GPRC6AQ5T6X5 926 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 AFTPHQ6ULP2 937 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 CES3Q6UWW8 571 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 MICALCLQ6ZW33 695 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 KANSL1Q7Z3B3 1105 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 AGGF1Q8N302 714 aaeCLIP14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 SLC25A45Q8N413 288 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 ZNF548Q8NEK5 533 aaPredicted RBP14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 DDHD1Q8NEL9 900 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 OR6P1Q8NGX9 317 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 ULK4Q96C45 1275 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 MFSD3Q96ES6 412 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 SCARF2Q96GP6 870 aaPredicted RBP14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 SIGLEC10Q96LC7 697 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 PWWP2AQ96N64 755 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 LRRC61Q9BV99 259 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 OR2AG1Q9H205 316 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 RMI1Q9H9A7 625 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 UCKL1Q9NWZ5 548 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 CDV3Q9UKY7 258 aaKnown RBP14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 MAD1L1Q9Y6D9 718 aa14.31□□□□□ -0.12
DNMT3A-208ENST00000466601 ZNF106Q9H2Y7 1883 aaKnown RBP14.3□□□□□ -0.12
DNMT3A-208ENST00000466601 FAM237BA0A1B0GVD1 139 aa14.3□□□□□ -0.12
DNMT3A-208ENST00000466601 NEMP2A6NFY4 417 aa14.3□□□□□ -0.12
DNMT3A-208ENST00000466601 OR51F1A6NGY5 319 aa14.3□□□□□ -0.12
DNMT3A-208ENST00000466601 GPR89AB7ZAQ6 455 aa14.3□□□□□ -0.12
DNMT3A-208ENST00000466601 SLC30A4O14863 429 aa14.3□□□□□ -0.12
DNMT3A-208ENST00000466601 FLRT2O43155 660 aa14.3□□□□□ -0.12
DNMT3A-208ENST00000466601 AQP9O43315 295 aa14.3□□□□□ -0.12
DNMT3A-208ENST00000466601 VEGFDO43915 354 aa14.3□□□□□ -0.12
DNMT3A-208ENST00000466601 NUAK1O60285 661 aa14.3□□□□□ -0.12
DNMT3A-208ENST00000466601 DNAJC6O75061 913 aa14.3□□□□□ -0.12
DNMT3A-208ENST00000466601 CDK14O94921 469 aa14.3□□□□□ -0.12
DNMT3A-208ENST00000466601 GPR89BP0CG08 455 aa14.3□□□□□ -0.12
DNMT3A-208ENST00000466601 ZNF8P17098 575 aaPredicted RBP14.3□□□□□ -0.12
DNMT3A-208ENST00000466601 CDKN1CP49918 316 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms