RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 TAF1P21675 1872 aa4.24□□□□□ -1.73
LRCH3-211ENST00000466054 BTBD18B2RXH4 712 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 MAP2K7O14733 419 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 ATP2A1O14983 1001 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 GFPT2O94808 682 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 CLDN14O95500 239 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 ART1P52961 327 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 NLRP5P59047 1200 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 SREBF2Q12772 1141 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 ZNF155Q12901 538 aaPredicted RBP4.23□□□□□ -1.73
LRCH3-211ENST00000466054 EPS8Q12929 822 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 DLG1Q12959 904 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 CHAF1BQ13112 559 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 IKQ13123 557 aaPredicted RBP4.23□□□□□ -1.73
LRCH3-211ENST00000466054 WTAPQ15007 396 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 KIF19Q2TAC6 998 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 RILPL1Q5EBL4 403 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 RAB41Q5JT25 222 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 RARS2Q5T160 578 aaKnown RBP4.23□□□□□ -1.73
LRCH3-211ENST00000466054 LRIF1Q5T3J3 769 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 RGMBQ6NW40 437 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 SZRD1Q7Z422 152 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 NRROSQ86YC3 692 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 TMTC2Q8N394 836 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 PCDH20Q8N6Y1 951 aaKnown RBP4.23□□□□□ -1.73
LRCH3-211ENST00000466054 OR8K5Q8NH50 307 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 THAP6Q8TBB0 222 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 DNAAF4Q8WXU2 420 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 TANKQ92844 425 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 ORAI1Q96D31 301 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 ELMOD3Q96FG2 381 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 C3orf30Q96M34 536 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 MAK16Q9BXY0 300 aaKnown RBP4.23□□□□□ -1.73
LRCH3-211ENST00000466054 TMEM39BQ9GZU3 492 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 PLK3Q9H4B4 646 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 EPB41L5Q9HCM4 733 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 SETD4Q9NVD3 440 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 ZNF224Q9NZL3 707 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 STK39Q9UEW8 545 aa4.23□□□□□ -1.73
LRCH3-211ENST00000466054 R3HDM2Q9Y2K5 976 aaKnown RBP4.23□□□□□ -1.73
LRCH3-211ENST00000466054 ZNF644Q9H582 1327 aaPredicted RBP4.22□□□□□ -1.73
LRCH3-211ENST00000466054 NOTCH3Q9UM47 2321 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 ARHGEF40Q8TER5 1519 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 SRRM3A6NNA2 597 aaPredicted RBP4.22□□□□□ -1.73
LRCH3-211ENST00000466054 HS3ST1O14792 307 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 SMAD9O15198 467 aaKnown RBP4.22□□□□□ -1.73
LRCH3-211ENST00000466054 MID1O15344 667 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 OGG1O15527 345 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 KCNN4O15554 427 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 DDNO94850 711 aaPredicted RBP4.22□□□□□ -1.73
LRCH3-211ENST00000466054 PMS2P2O95744 297 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 LINC00271P0C7V0 271 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 CSH1P0DML2 217 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 CSH2P0DML3 217 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 PON1P27169 355 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 APOBEC1P41238 236 aaKnown RBP4.22□□□□□ -1.73
LRCH3-211ENST00000466054 TAS2R38P59533 333 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 SNTA1Q13424 505 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 IRF3Q14653 427 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 MYLK3Q32MK0 819 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 KIAA0930Q6ICG6 404 aaPredicted RBP4.22□□□□□ -1.73
LRCH3-211ENST00000466054 BRAT1Q6PJG6 821 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 RBM23Q86U06 439 aaKnown RBP4.22□□□□□ -1.73
LRCH3-211ENST00000466054 SRBD1Q8N5C6 995 aaKnown RBP4.22□□□□□ -1.73
LRCH3-211ENST00000466054 HJURPQ8NCD3 748 aaPredicted RBP4.22□□□□□ -1.73
LRCH3-211ENST00000466054 OR1J2Q8NGS2 313 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 LMO3Q8TAP4 145 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 BICD1Q96G01 975 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 GRAMD2BQ96HH9 432 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 RSRC1Q96IZ7 334 aaKnown RBP4.22□□□□□ -1.73
LRCH3-211ENST00000466054 ADGRG7Q96K78 797 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 EGLN2Q96KS0 407 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 NUDCD1Q96RS6 583 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 CSF3RQ99062 836 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 GAREM1Q9H706 876 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 SEBOXQ9HB31 216 aaPredicted RBP4.22□□□□□ -1.73
LRCH3-211ENST00000466054 SUCLA2Q9P2R7 463 aaPredicted RBP4.22□□□□□ -1.73
LRCH3-211ENST00000466054 SWAP70Q9UH65 585 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 EXO1Q9UQ84 846 aaKnown RBP4.22□□□□□ -1.73
LRCH3-211ENST00000466054 AMDHD2Q9Y303 409 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 CMAHPQ9Y471 501 aa4.22□□□□□ -1.73
LRCH3-211ENST00000466054 MAGEA13PA6NCF6 341 aa4.21□□□□□ -1.74
LRCH3-211ENST00000466054 KDM4BO94953 1096 aa4.21□□□□□ -1.74
LRCH3-211ENST00000466054 ICAM1P05362 532 aa4.21□□□□□ -1.74
LRCH3-211ENST00000466054 ANXA7P20073 488 aaKnown RBP4.21□□□□□ -1.74
LRCH3-211ENST00000466054 UGT1A1P22309 533 aa4.21□□□□□ -1.74
LRCH3-211ENST00000466054 GPR143P51810 404 aa4.21□□□□□ -1.74
LRCH3-211ENST00000466054 KCNT1Q5JUK3 1230 aa4.21□□□□□ -1.74
LRCH3-211ENST00000466054 LCN10Q6JVE6 187 aa4.21□□□□□ -1.74
LRCH3-211ENST00000466054 ZNF280DQ6N043 979 aa4.21□□□□□ -1.74
LRCH3-211ENST00000466054 TRNP1Q6NT89 227 aa4.21□□□□□ -1.74
LRCH3-211ENST00000466054 PAPD4Q6PIY7 484 aaKnown RBP4.21□□□□□ -1.74
LRCH3-211ENST00000466054 SDCCAG8Q86SQ7 713 aaPredicted RBP4.21□□□□□ -1.74
LRCH3-211ENST00000466054 ARID3BQ8IVW6 561 aaPredicted RBP4.21□□□□□ -1.74
LRCH3-211ENST00000466054 MCEMP1Q8IX19 187 aa4.21□□□□□ -1.74
LRCH3-211ENST00000466054 OR2AK2Q8NG84 335 aa4.21□□□□□ -1.74
LRCH3-211ENST00000466054 RHBDF1Q96CC6 855 aa4.21□□□□□ -1.74
LRCH3-211ENST00000466054 QRFPRQ96P65 431 aa4.21□□□□□ -1.74
LRCH3-211ENST00000466054 DUX5Q96PT3 197 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms