RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 TMCC1O94876 653 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 POP4O95707 220 aaKnown RBP5.51□□□□□ -1.53
VPS41-211ENST00000466017 NDST3O95803 873 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 GSRP00390 522 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 PRLP01236 227 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 MPOP05164 745 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 DLDP09622 509 aaKnown RBP5.51□□□□□ -1.53
VPS41-211ENST00000466017 GLI4P10075 376 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 SRCP12931 536 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 HNRNPLP14866 589 aaKnown RBP eCLIP5.51□□□□□ -1.53
VPS41-211ENST00000466017 POLR2EP19388 210 aaKnown RBP5.51□□□□□ -1.53
VPS41-211ENST00000466017 PI3P19957 117 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 CA4P22748 312 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 PRKCHP24723 683 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 ADRA1DP25100 572 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 CD70P32970 193 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 GJA4P35212 333 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 PHBP35232 272 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 MC3RP41968 323 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 ECI1P42126 302 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 TNFRSF4P43489 277 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 LMAN1P49257 510 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 WNT3AP56704 352 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 SNRPD1P62314 119 aaKnown RBP5.51□□□□□ -1.53
VPS41-211ENST00000466017 PRR5P85299 388 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 ECT2LQ008S8 904 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 CDK18Q07002 472 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 PDIA2Q13087 525 aaKnown RBP5.51□□□□□ -1.53
VPS41-211ENST00000466017 HTR4Q13639 388 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 ENPP2Q13822 863 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 SLC29A2Q14542 456 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 ZNF235Q14590 738 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 IHHQ14623 411 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 SMAD2Q15796 467 aaKnown RBP5.51□□□□□ -1.53
VPS41-211ENST00000466017 FXNQ16595 210 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 ITPRIPL2Q3MIP1 535 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 CARD16Q5EG05 197 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 TNFAIP8L3Q5GJ75 292 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 PCID2Q5JVF3 399 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 SPANXN3Q5MJ09 141 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 STEAP4Q687X5 459 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 BICRALQ6AI39 1079 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 PARM1Q6UWI2 310 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 CYP2R1Q6VVX0 501 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 C3orf62Q6ZUJ4 267 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 NLRP9Q7RTR0 991 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 SRLQ86TD4 932 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 PALM2Q8IXS6 379 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 LMNTD2Q8IXW0 634 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 YAF2Q8IY57 180 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 RIBC1Q8N443 379 aaPredicted RBP5.51□□□□□ -1.53
VPS41-211ENST00000466017 CCDC33Q8N5R6 958 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 OR2AP1Q8NGE2 309 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 USP33Q8TEY7 942 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 DNASE1L2Q92874 299 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 FGF14Q92915 247 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 ECHDC3Q96DC8 303 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 C1orf159Q96HA4 380 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 ZNF419Q96HQ0 510 aaPredicted RBP5.51□□□□□ -1.53
VPS41-211ENST00000466017 SGSM3Q96HU1 749 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 ZNF641Q96N77 438 aaPredicted RBP5.51□□□□□ -1.53
VPS41-211ENST00000466017 TRIB3Q96RU7 358 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 SH3GL2Q99962 352 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 SEMA3CQ99985 751 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 TBL1YQ9BQ87 522 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 CINPQ9BW66 212 aaPredicted RBP5.51□□□□□ -1.53
VPS41-211ENST00000466017 SAYSD1Q9NPB0 183 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 NT5MQ9NPB1 228 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 ZNF446Q9NWS9 450 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 ELOVL2Q9NXB9 296 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 PLK2Q9NYY3 685 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 MOCS1Q9NZB8 636 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 NINJ2Q9NZG7 142 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 SEPT10Q9P0V9 454 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 DEC1Q9P2X7 70 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 LHX3Q9UBR4 397 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 SUN2Q9UH99 717 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 SLC25A13Q9UJS0 675 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 SLC8A2Q9UPR5 921 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 ERVW-1Q9UQF0 538 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 FAM50BQ9Y247 325 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 FAM169AQ9Y6X4 670 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 ANKRD66B4E2M5 251 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 TRAFD1O14545 582 aaPredicted RBP5.5□□□□□ -1.53
VPS41-211ENST00000466017 OPA1O60313 960 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 IGSF6O95976 241 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 MT-CYBP00156 380 aaPredicted RBP5.5□□□□□ -1.53
VPS41-211ENST00000466017 MT-CO1P00395 513 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 C1QAP02745 245 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 FUCA1P04066 466 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 FGF1P05230 155 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 ATXN1LP0C7T5 689 aaKnown RBP5.5□□□□□ -1.53
VPS41-211ENST00000466017 ARSAP15289 507 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 PGAM1P18669 254 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 PAMP19021 973 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 OPRD1P41143 372 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 ELK3P41970 407 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 GRIA1P42261 906 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 SUOXP51687 545 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 GPX6P59796 221 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms