RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 CHST15Q7LFX5 561 aaPredicted RBP11.55□□□□□ -0.56
CUX1-207ENST00000465461 GDAP1Q8TB36 358 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 ZNF398Q8TD17 642 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 CPT1BQ92523 772 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 ZNF778Q96MU6 729 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 CDC6Q99741 560 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 ASB8Q9H765 288 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 TRIM39Q9HCM9 518 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 NLGN3Q9NZ94 848 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 NFKBIL1Q9UBC1 381 aaPredicted RBP11.55□□□□□ -0.56
CUX1-207ENST00000465461 GULP1Q9UBP9 304 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 SLC2A6Q9UGQ3 507 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 FEZ2Q9UHY8 353 aaPredicted RBP11.55□□□□□ -0.56
CUX1-207ENST00000465461 CSNK1G3Q9Y6M4 447 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 U3KQA8 63 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 CPED1A4D0V7 1026 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 LMO7DNF2Z398 122 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 AVILO75366 819 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 SRP72O76094 671 aaKnown RBP11.54□□□□□ -0.56
CUX1-207ENST00000465461 TMEM63AO94886 807 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 PRAMEF1O95521 474 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 IVLP07476 585 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 ALPPL2P10696 532 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 MGAT1P26572 445 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 MC4RP32245 332 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 PAFAH1B1P43034 410 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 FNTAP49354 379 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 ARSDP51689 593 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 DAB2P98082 770 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 C2orf54Q08AI8 447 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 FOXC1Q12948 553 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 KCNJ11Q14654 390 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 ELOCQ15369 112 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 PPP1R7Q15435 360 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 HS1BP3Q53T59 392 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 SLC30A9Q6PML9 568 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 C4orf22Q6V702 233 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 DET1Q7L5Y6 550 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 GKN2Q86XP6 184 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 MARCH9Q86YJ5 346 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 GALNT13Q8IUC8 556 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 FSTL5Q8N475 847 aaPredicted RBP11.54□□□□□ -0.56
CUX1-207ENST00000465461 FAM46DQ8NEK8 389 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 ZNF592Q92610 1267 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 TRIM44Q96DX7 344 aaPredicted RBP11.54□□□□□ -0.56
CUX1-207ENST00000465461 SCARF2Q96GP6 870 aaPredicted RBP11.54□□□□□ -0.56
CUX1-207ENST00000465461 CDKN2AIPNLQ96HQ2 116 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 TBATAQ96M53 351 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 OR2M4Q96R27 311 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 CDH19Q9H159 772 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 EIF2B3Q9NR50 452 aaKnown RBP11.54□□□□□ -0.56
CUX1-207ENST00000465461 CHRAC1Q9NRG0 131 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 SPATS2LQ9NUQ6 558 aaKnown RBP11.54□□□□□ -0.56
CUX1-207ENST00000465461 NLE1Q9NVX2 485 aaPredicted RBP11.54□□□□□ -0.56
CUX1-207ENST00000465461 GPR34Q9UPC5 381 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 KCNK6Q9Y257 313 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 PLXNB3Q9ULL4 1909 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 SPTBN4Q9H254 2564 aa11.54□□□□□ -0.56
CUX1-207ENST00000465461 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.53□□□□□ -0.56
CUX1-207ENST00000465461 TRBV23OR9-2A0A075B6M9 112 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 MROH6A6NGR9 719 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 B4DGG1 531 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 TPP1O14773 563 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 GRID2O43424 1007 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 NUAK1O60285 661 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 EML2O95834 649 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 ACP5P13686 325 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 CKMT2P17540 419 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 ACADVLP49748 655 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 TMEM115Q12893 351 aaPredicted RBP11.53□□□□□ -0.56
CUX1-207ENST00000465461 SMAD1Q15797 465 aaKnown RBP11.53□□□□□ -0.56
CUX1-207ENST00000465461 ZRANB3Q5FWF4 1079 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 C6orf132Q5T0Z8 1188 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 GPRC6AQ5T6X5 926 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 ZDHHC20Q5W0Z9 365 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 GUSBP11Q6P575 273 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 CES3Q6UWW8 571 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 DHRS13Q6UX07 377 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 GLRX5Q86SX6 157 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 PHYKPLQ8IUZ5 450 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 SLC35F3Q8IY50 421 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 MPP5Q8N3R9 675 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 CHCHD4Q8N4Q1 142 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 RASGEF1AQ8N9B8 481 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 KYQ8NBH2 561 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 GPBAR1Q8TDU6 330 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 GRK7Q8WTQ7 553 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 STYXQ8WUJ0 223 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 PATE1Q8WXA2 126 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 VPS35Q96QK1 796 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 KRT12Q99456 494 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 TRIM56Q9BRZ2 755 aaKnown RBP11.53□□□□□ -0.56
CUX1-207ENST00000465461 TRIM51Q9BSJ1 452 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 DUSP23Q9BVJ7 150 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 DPEP2Q9H4A9 486 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 SYBUQ9NX95 663 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 TAAR2Q9P1P5 351 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 VPS18Q9P253 973 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 SLC23A2Q9UGH3 650 aa11.53□□□□□ -0.56
CUX1-207ENST00000465461 COL5A1P20908 1838 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms