RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 MYLKQ15746 1914 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 RPP40O75818 363 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 PAK4O96013 591 aaPredicted RBP16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 DHRS4L1P0CG22 281 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 MAT2AP31153 395 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 ARCN1P48444 511 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 XIAPP98170 497 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 SEPT7Q16181 437 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 LVRNQ6Q4G3 990 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 CYP2U1Q7Z449 544 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 LONP2Q86WA8 852 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 TRIM69Q86WT6 500 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 NRSN1Q8IZ57 195 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 UNC5BQ8IZJ1 945 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 OTUD6BQ8N6M0 293 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 TCP10LQ8TDR4 215 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 KLK6Q92876 244 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 SCAMP4Q969E2 229 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 SLC17A9Q9BYT1 436 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 ABCG8Q9H221 673 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 FAM83DQ9H4H8 585 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 FNDC3AQ9Y2H6 1198 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 ABCA7Q8IZY2 2146 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 SDK1Q7Z5N4 2213 aa16.82■□□□□ 0.28
EXOSC3-203ENST00000465229 CCDC162PA2VCL2 907 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 H7C0S8 307 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 GAPDHSO14556 408 aaPredicted RBP16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 VAPBO95292 243 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 PYGBP11216 843 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 PTPN5P54829 565 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 MGAT5Q09328 741 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 SGCGQ13326 291 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 PEX6Q13608 980 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 AGERQ15109 404 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 KIAA0930Q6ICG6 404 aaPredicted RBP16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 CCDC121Q6ZUS5 278 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 LRRC8CQ8TDW0 803 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 ACMSDQ8TDX5 336 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 NELL1Q92832 810 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 SPACA7Q96KW9 195 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 PLEKHG4BQ96PX9 1271 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 PAIP2Q9BPZ3 127 aaKnown RBP16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 IL1RAPL1Q9NZN1 696 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 LATO43561 262 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 NDUFS2O75306 463 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 RFPL1O75677 317 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 CACNA1HO95180 2353 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 IGHV4-34P06331 123 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 PAMP19021 973 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 BCKDHBP21953 392 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 SPAM1P38567 509 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 ETV4P43268 484 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 CCR5P51681 352 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 DCDC1P59894 354 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 ZDHHC20Q5W0Z9 365 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 KIAA0895LQ68EN5 471 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 SPATA21Q7Z572 469 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 OR6P1Q8NGX9 317 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 ASB12Q8WXK4 309 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 NUS1Q96E22 293 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 RIOK2Q9BVS4 552 aaKnown RBP16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 DOCK9Q9BZ29 2069 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 PITPNM3Q9BZ71 974 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 CDH19Q9H159 772 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 RAD18Q9NS91 495 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 NFKBIL1Q9UBC1 381 aaPredicted RBP16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 GRID1Q9ULK0 1009 aa16.81■□□□□ 0.28
EXOSC3-203ENST00000465229 OR51F1A6NGY5 319 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 MYO1CO00159 1063 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 COPEO14579 308 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 SLC31A1O15431 190 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 GOT2P00505 430 aaKnown RBP16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 MC4RP32245 332 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 PRAMEP78395 509 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 ANGPT1Q15389 498 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 SMAD1Q15797 465 aaKnown RBP16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 CHRNA6Q15825 494 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 WSCD2Q2TBF2 565 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 LACTB2Q53H82 288 aaPredicted RBP16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 HENMT1Q5T8I9 393 aaKnown RBP16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 FAM151BQ6UXP7 276 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 SLC36A4Q6YBV0 504 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 ZNF765Q7L2R6 523 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 NLRP8Q86W28 1048 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 CADM4Q8NFZ8 388 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 BIRC7Q96CA5 298 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 AP2M1Q96CW1 435 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 CERS2Q96G23 380 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 AGAP2Q99490 1192 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 KLF6Q99612 283 aaPredicted RBP16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 FAM126AQ9BYI3 521 aaPredicted RBP16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 EBF2Q9HAK2 575 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 C20orf96Q9NUD7 363 aaPredicted RBP16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 KCTD5Q9NXV2 234 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 APPL1Q9UKG1 709 aa16.8■□□□□ 0.28
EXOSC3-203ENST00000465229 LRRK1Q38SD2 2015 aa16.79■□□□□ 0.28
EXOSC3-203ENST00000465229 GLYATL1P3A0A0U1RQE8 302 aa16.79■□□□□ 0.28
EXOSC3-203ENST00000465229 HMX2A2RU54 273 aa16.79■□□□□ 0.28
EXOSC3-203ENST00000465229 CCT8L1PA6NM43 557 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms