RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 MGAT5BQ3V5L5 792 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 TMEM259Q4ZIN3 620 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 PDCD4Q53EL6 469 aaKnown RBP8.46□□□□□ -1.06
ACTB-208ENST00000464611 ZNF789Q5FWF6 425 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 CDKL4Q5MAI5 379 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 ADGRF1Q5T601 910 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 IL31Q6EBC2 164 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 SLC8B1Q6J4K2 584 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 LCN8Q6JVE9 175 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 ZNF549Q6P9A3 640 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 PAOXQ6QHF9 649 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 BLOC1S3Q6QNY0 202 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 GK5Q6ZS86 529 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 GLT6D1Q7Z4J2 308 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 PTRH1Q86Y79 214 aaKnown RBP8.46□□□□□ -1.06
ACTB-208ENST00000464611 MIB1Q86YT6 1006 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 GPR65Q8IYL9 337 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 PGBD5Q8N414 524 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.46□□□□□ -1.06
ACTB-208ENST00000464611 MFSD2AQ8NA29 543 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 DBF4BQ8NFT6 615 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 TNIP2Q8NFZ5 429 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 TWIST2Q8WVJ9 160 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 ATP6V1E2Q96A05 226 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 RMDN1Q96DB5 314 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 TRMT2BQ96GJ1 504 aaKnown RBP8.46□□□□□ -1.06
ACTB-208ENST00000464611 MYRFLQ96LU7 910 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 PGLYRP2Q96PD5 576 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 KLHL5Q96PQ7 755 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 GCNAQ96QF7 691 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 TTPALQ9BTX7 342 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 C9orf16Q9BUW7 83 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 BRINP2Q9C0B6 783 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 AKTIPQ9H8T0 292 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 COPS7BQ9H9Q2 264 aaPredicted RBP8.46□□□□□ -1.06
ACTB-208ENST00000464611 CYP4F12Q9HCS2 524 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 PTTG2Q9NZH5 202 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 NUDT4Q9NZJ9 180 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 TRPM5Q9NZQ8 1165 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 KLHL42Q9P2K6 505 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 SUN2Q9UH99 717 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 POLG2Q9UHN1 485 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 TRMT6Q9UJA5 497 aaKnown RBP8.46□□□□□ -1.06
ACTB-208ENST00000464611 LEF1Q9UJU2 399 aaPredicted RBP8.46□□□□□ -1.06
ACTB-208ENST00000464611 STOML2Q9UJZ1 356 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 DMTF1Q9Y222 760 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 LZTS1Q9Y250 596 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 CRYL1Q9Y2S2 319 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 DNAJC15Q9Y5T4 150 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 MYO16Q9Y6X6 1858 aa8.46□□□□□ -1.06
ACTB-208ENST00000464611 NEMP2A6NFY4 417 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 ANKRD66B4E2M5 251 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 EIF3FO00303 357 aaPredicted RBP8.45□□□□□ -1.06
ACTB-208ENST00000464611 ARNTLO00327 626 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 FBP2O00757 339 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 CLGNO14967 610 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 STX7O15400 261 aaKnown RBP8.45□□□□□ -1.06
ACTB-208ENST00000464611 CLASP2O75122 1294 aaKnown RBP8.45□□□□□ -1.06
ACTB-208ENST00000464611 S100BP04271 92 aaPredicted RBP8.45□□□□□ -1.06
ACTB-208ENST00000464611 CYBBP04839 570 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 JUNP05412 331 aaKnown RBP8.45□□□□□ -1.06
ACTB-208ENST00000464611 RHOCP08134 193 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 RPS17P08708 135 aaKnown RBP8.45□□□□□ -1.06
ACTB-208ENST00000464611 OR4Q2P0C623 313 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 PRR35P0CG20 571 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 MTHFD2P13995 350 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 KCNA5P22460 613 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 RPS3P23396 243 aaKnown RBP eCLIP8.45□□□□□ -1.063e-50■■■□□ 14.6
ACTB-208ENST00000464611 FASP25445 335 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 HOXD9P28356 352 aaPredicted RBP8.45□□□□□ -1.06
ACTB-208ENST00000464611 MAGEA10P43363 369 aaPredicted RBP8.45□□□□□ -1.06
ACTB-208ENST00000464611 CCR10P46092 362 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 CSNK1DP48730 415 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 PGFP49763 221 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 RGS4P49798 205 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 POLE2P56282 527 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 AP1S1P61966 158 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 ERVK-8P63133 956 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 SH3BP2P78314 561 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 LSAMPQ13449 338 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 PCBP2Q15366 365 aaKnown RBP eCLIP8.45□□□□□ -1.06
ACTB-208ENST00000464611 TLR1Q15399 786 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 PFKFB4Q16877 469 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 CNPY1Q3B7I2 92 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 IL23RQ5VWK5 629 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 FUT10Q6P4F1 479 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 TMEM207Q6UWW9 146 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 ZBTB49Q6ZSB9 765 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 ERMP1Q7Z2K6 904 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 ADAMTSL2Q86TH1 951 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 GPSM1Q86YR5 675 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 NPAS4Q8IUM7 802 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 TBC1D21Q8IYX1 336 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 SPATA6LQ8N4H0 392 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 TERB1Q8NA31 727 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 ATAD1Q8NBU5 361 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 PAPD5Q8NDF8 572 aaKnown RBP8.45□□□□□ -1.06
ACTB-208ENST00000464611 OR52K2Q8NGK3 314 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 NAT14Q8WUY8 206 aa8.45□□□□□ -1.06
ACTB-208ENST00000464611 PTERQ96BW5 349 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms