RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 KCTD19Q17RG1 926 aaPredicted RBP16.88■□□□□ 0.29
VPS52-215ENST00000464425 PYCR3Q53H96 274 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 FAM151BQ6UXP7 276 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 EFL1Q7Z2Z2 1120 aaKnown RBP16.88■□□□□ 0.29
VPS52-215ENST00000464425 NRROSQ86YC3 692 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 GALNT13Q8IUC8 556 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 SFTPA2Q8IWL1 248 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 KLHL7Q8IXQ5 586 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 KYQ8NBH2 561 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 IFI44Q8TCB0 444 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 GPBAR1Q8TDU6 330 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 SCARF2Q96GP6 870 aaPredicted RBP16.88■□□□□ 0.29
VPS52-215ENST00000464425 PLEKHG4BQ96PX9 1271 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 DPEP2Q9H4A9 486 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 LRRC40Q9H9A6 602 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 ETNK1Q9HBU6 452 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 PIH1D1Q9NWS0 290 aaKnown RBP16.88■□□□□ 0.29
VPS52-215ENST00000464425 TRNAU1APQ9NX07 287 aaKnown RBP16.88■□□□□ 0.29
VPS52-215ENST00000464425 NCKIPSDQ9NZQ3 722 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 NFKBIL1Q9UBC1 381 aaPredicted RBP16.88■□□□□ 0.29
VPS52-215ENST00000464425 PADI4Q9UM07 663 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 NEUROG3Q9Y4Z2 214 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 PCYT1BQ9Y5K3 369 aaPredicted RBP16.88■□□□□ 0.29
VPS52-215ENST00000464425 ST14Q9Y5Y6 855 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 C2orf81A6NN90 581 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 B4DGG1 531 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 DNAJC6O75061 913 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 AP2A1O95782 977 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 CDK4P11802 303 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 LPOP22079 712 aaPredicted RBP16.87■□□□□ 0.29
VPS52-215ENST00000464425 SPAM1P38567 509 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 LMAN1P49257 510 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 DR1Q01658 176 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 ILF3Q12906 894 aaKnown RBP eCLIP16.87■□□□□ 0.29
VPS52-215ENST00000464425 MSLNQ13421 630 aaPredicted RBP16.87■□□□□ 0.29
VPS52-215ENST00000464425 SEMA5AQ13591 1074 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 DHX34Q14147 1143 aaKnown RBP16.87■□□□□ 0.29
VPS52-215ENST00000464425 TAF1AQ15573 450 aaPredicted RBP16.87■□□□□ 0.29
VPS52-215ENST00000464425 SMAD1Q15797 465 aaKnown RBP16.87■□□□□ 0.29
VPS52-215ENST00000464425 CHRNA6Q15825 494 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 ATP13A5Q4VNC0 1218 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 ZDHHC20Q5W0Z9 365 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 SLC30A9Q6PML9 568 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 TMPRSS7Q7RTY8 843 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 ARL10Q8N8L6 244 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 MNS1Q8NEH6 495 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 OR4K2Q8NGD2 314 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 BRSK1Q8TDC3 778 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 GLYATL1Q969I3 302 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 OR2M4Q96R27 311 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 GSDMCQ9BYG8 508 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 OR2AG1Q9H205 316 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 ARNT2Q9HBZ2 717 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 RAB6BQ9NRW1 208 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 SPATS2LQ9NUQ6 558 aaKnown RBP16.87■□□□□ 0.29
VPS52-215ENST00000464425 VPS18Q9P253 973 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 ATXN10Q9UBB4 475 aa16.87■□□□□ 0.29
VPS52-215ENST00000464425 KNTC1P50748 2209 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 GLYATL1P3A0A0U1RQE8 302 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 EME2A4GXA9 379 aaPredicted RBP16.86■□□□□ 0.29
VPS52-215ENST00000464425 E7EVH7 732 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 UGT1A9O60656 530 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 MTX2O75431 263 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 SUN1O94901 812 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 JUPP14923 745 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 ZNF8P17098 575 aaPredicted RBP16.86■□□□□ 0.29
VPS52-215ENST00000464425 UGT1A6P19224 532 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 UGT1A1P22309 533 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 UGT1A4P22310 534 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 UGT1A3P35503 534 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 UGT1A5P35504 534 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 TMPRSS15P98073 1019 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 E2F1Q01094 437 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 INSM1Q01101 510 aaPredicted RBP16.86■□□□□ 0.29
VPS52-215ENST00000464425 PTK6Q13882 451 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 PPP1R7Q15435 360 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 HES3Q5TGS1 186 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 PDPK2PQ6A1A2 396 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 MAATS1Q7Z4T9 603 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 GALNT15Q8N3T1 639 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 GDAP1Q8TB36 358 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 KRT12Q99456 494 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 ABCG4Q9H172 646 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 UGT1A7Q9HAW7 530 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 UGT1A10Q9HAW8 530 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 UGT1A8Q9HAW9 530 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 TRIM39Q9HCM9 518 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 EIF2B3Q9NR50 452 aaKnown RBP16.86■□□□□ 0.29
VPS52-215ENST00000464425 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.86■□□□□ 0.29
VPS52-215ENST00000464425 TAAR2Q9P1P5 351 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 TMPRSS11EQ9UL52 423 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 MSRB2Q9Y3D2 182 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 ASXL3Q9C0F0 2248 aa16.86■□□□□ 0.29
VPS52-215ENST00000464425 TPRP12270 2363 aaKnown RBP16.86■□□□□ 0.29
VPS52-215ENST00000464425 GPR39O43194 453 aa16.85■□□□□ 0.29
VPS52-215ENST00000464425 NUAK1O60285 661 aa16.85■□□□□ 0.29
VPS52-215ENST00000464425 CRTAMO95727 393 aa16.85■□□□□ 0.29
VPS52-215ENST00000464425 CA5AP35218 305 aa16.85■□□□□ 0.29
VPS52-215ENST00000464425 CDK16Q00536 496 aa16.85■□□□□ 0.29
VPS52-215ENST00000464425 GPS1Q13098 491 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms