RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 REPS2Q8NFH8 660 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 ABHD11Q8NFV4 315 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 OR6B3Q8NGW1 331 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 DNAJB8Q8NHS0 232 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 MAGEE2Q8TD90 523 aaPredicted RBP7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 KCTD13Q8WZ19 329 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 FCGR1BQ92637 280 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 PEX13Q92968 403 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 TRIM63Q969Q1 353 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 WNK4Q96J92 1243 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 BTN2A3PQ96KV6 586 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 PPP1R36Q96LQ0 422 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 ALPK1Q96QP1 1244 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 FCRL5Q96RD9 977 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 GMLQ99445 158 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 AGAP2Q99490 1192 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 CTRCQ99895 268 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 RBM4BQ9BQ04 359 aaKnown RBP7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 TBL1YQ9BQ87 522 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 HEPHQ9BQS7 1158 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 FEM1AQ9BSK4 669 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 RBM4Q9BWF3 364 aaKnown RBP7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 GLIS2Q9BZE0 524 aaPredicted RBP7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 ASPSCR1Q9BZE9 553 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 TMEM39BQ9GZU3 492 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 NANOGQ9H9S0 305 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 CAB39LQ9H9S4 337 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 SDR39U1Q9NRG7 319 aaPredicted RBP7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 SCN3BQ9NY72 215 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 USE1Q9NZ43 259 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 NPAP1Q9NZP6 1156 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 SLC17A6Q9P2U8 582 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 HMGXB4Q9UGU5 601 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 C3orf18Q9UK00 162 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 PDE10AQ9Y233 779 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 TMEM98Q9Y2Y6 226 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 PCDHGB1Q9Y5G3 927 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 TRIP11Q15643 1979 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 MN1Q10571 1320 aaPredicted RBP7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 CITO14578 2027 aa7.16□□□□□ -1.26
CLSTN1-204ENST00000464286 COL11A1P12107 1806 aaPredicted RBP7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 MYO18AQ92614 2054 aaKnown RBP7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 PNMA8CA0A1B0GUJ8 204 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 FAM172BPA6NC97 362 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 SYCE1LA8MT33 242 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 ZNF99A8MXY4 864 aaPredicted RBP7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 FAM47E-STBD1D6RA91 191 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 AZIN1O14977 448 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 FGF10O15520 208 aaPredicted RBP7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 CACNG3O60359 315 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 PRMT3O60678 531 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 EEDO75530 441 aaKnown RBP7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 MAP3K6O95382 1288 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 PTTG1O95997 202 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 APBA3O96018 575 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 KRT6AP02538 564 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 KRT6BP04259 564 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 EDN1P05305 212 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 ENO2P09104 434 aaPredicted RBP7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 GSTT2P0CG29 244 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 GSTT2BP0CG30 244 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 ZNF182P17025 639 aaPredicted RBP7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 GPX3P22352 226 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 CCNCP24863 283 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 ADRA1BP35368 520 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 GLRBP48167 497 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 ST13P50502 369 aaKnown RBP7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 AFF1P51825 1210 aaKnown RBP7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 ARSFP54793 590 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 GJA9P57773 515 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 CXCR4P61073 352 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 HERVK_113P63132 956 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 CCNA1P78396 465 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 ORC1Q13415 861 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 MAPRE1Q15691 268 aaKnown RBP7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 DLG2Q15700 870 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 FXNQ16595 210 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 PHKG1Q16816 387 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 GEN1Q17RS7 908 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 SV2CQ496J9 727 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 ZC3H12BQ5HYM0 836 aaKnown RBP7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 MAP1SQ66K74 1059 aaPredicted RBP7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 IQSEC1Q6DN90 963 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 TXNDC11Q6PKC3 985 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 ISLR2Q6UXK2 745 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 ATG14Q6ZNE5 492 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 PRSS48Q7RTY5 328 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 ACOT1Q86TX2 421 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 ARMC8Q8IUR7 673 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 ZC3H7AQ8IWR0 971 aaKnown RBP7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 ADHFE1Q8IWW8 467 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 CMTR2Q8IYT2 770 aaKnown RBP7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 DEFB106AQ8N104 65 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 ATP6V0D2Q8N8Y2 350 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 TXNDC5Q8NBS9 432 aaKnown RBP7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 OR52E4Q8NGH9 312 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 RHEBL1Q8TAI7 183 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 CHAC2Q8WUX2 184 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 HEXDCQ8WVB3 486 aa7.15□□□□□ -1.26
CLSTN1-204ENST00000464286 RORBQ92753 470 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms