RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 GOLGA8MH3BSY2 632 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 SCAMP1O15126 338 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 TMEM63AO94886 807 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 ANXA6P08133 673 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 PAMP19021 973 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 MGAT1P26572 445 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 AKT1P31749 480 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 MC4RP32245 332 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 GNPDA1P46926 289 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 ILF3Q12906 894 aaKnown RBP eCLIP19.61■□□□□ 0.73
COL9A3-204ENST00000463487 CALCOCO2Q13137 446 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 ANKRD22Q5VYY1 191 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 AFTPHQ6ULP2 937 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 RBFAQ8N0V3 343 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 GLMNQ92990 594 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 SERPINB12Q96P63 405 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 OR2M4Q96R27 311 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 TRIM51Q9BSJ1 452 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 GSDMCQ9BYG8 508 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 MRPL40Q9NQ50 206 aaKnown RBP19.61■□□□□ 0.73
COL9A3-204ENST00000463487 TRNAU1APQ9NX07 287 aaKnown RBP19.61■□□□□ 0.73
COL9A3-204ENST00000463487 NLGN3Q9NZ94 848 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 NCKIPSDQ9NZQ3 722 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 KLF15Q9UIH9 416 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 SUFUQ9UMX1 484 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 TMEM98Q9Y2Y6 226 aa19.61■□□□□ 0.73
COL9A3-204ENST00000463487 ZNF106Q9H2Y7 1883 aaKnown RBP19.6■□□□□ 0.73
COL9A3-204ENST00000463487 CTAGE15A4D2H0 777 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 SDR42E2A6NKP2 422 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 CFAP99D6REC4 459 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 TPP1O14773 563 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 SH3BP5O60239 455 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 CTAGE8P0CG41 777 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 PSMA3P25788 255 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 PPARGP37231 505 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-204ENST00000463487 CACNG1Q06432 222 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 LRP8Q14114 963 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 DNAJC21Q5F1R6 531 aaKnown RBP19.6■□□□□ 0.73
COL9A3-204ENST00000463487 ZRANB3Q5FWF4 1079 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 C8orf74Q6P047 294 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 LVRNQ6Q4G3 990 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 ZNF534Q76KX8 674 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 MARK2Q7KZI7 788 aaKnown RBP19.6■□□□□ 0.73
COL9A3-204ENST00000463487 CTAGE6Q86UF2 777 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 CTAGE4Q8IX94 777 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 CEP112Q8N8E3 955 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 DDHD1Q8NEL9 900 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 DCUN1D1Q96GG9 259 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 SCARF2Q96GP6 870 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-204ENST00000463487 CDKN2AIPNLQ96HQ2 116 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 TRIM31Q9BZY9 425 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 SUDS3Q9H7L9 328 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-204ENST00000463487 SYBUQ9NX95 663 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 DLL3Q9NYJ7 618 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 FTSJ1Q9UET6 329 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 ZNHIT2Q9UHR6 403 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 ANAPC5Q9UJX4 755 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 GPSM3Q9Y4H4 160 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 CABIN1Q9Y6J0 2220 aa19.6■□□□□ 0.73
COL9A3-204ENST00000463487 CCDC78A2IDD5 438 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 LMO7DNF2Z398 122 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 GAPDHSO14556 408 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-204ENST00000463487 FFAR2O15552 330 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 RAD51CO43502 376 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 UGT1A9O60656 530 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 CDK14O94921 469 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 UGT1A6P19224 532 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 MSH3P20585 1137 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 UGT1A1P22309 533 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 UGT1A4P22310 534 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 UGT1A3P35503 534 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 UGT1A5P35504 534 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 ID4P47928 161 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 POLD2P49005 469 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 XIAPP98170 497 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 KCTD19Q17RG1 926 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-204ENST00000463487 GPRC6AQ5T6X5 926 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 LYPLAL1Q5VWZ2 237 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 KANSL1Q7Z3B3 1105 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 PIP4P1Q86T03 277 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 CAND1Q86VP6 1230 aaKnown RBP19.59■□□□□ 0.73
COL9A3-204ENST00000463487 PDIK1LQ8N165 341 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 EID2Q8N6I1 236 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 OR6P1Q8NGX9 317 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 OR4C6Q8NH72 309 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 ZNF514Q96K75 400 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-204ENST00000463487 ERP44Q9BS26 406 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 KIFC1Q9BW19 673 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 OR2AG1Q9H205 316 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 TCEAL2Q9H3H9 227 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-204ENST00000463487 UGT1A7Q9HAW7 530 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 UGT1A10Q9HAW8 530 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 UGT1A8Q9HAW9 530 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 CHRAC1Q9NRG0 131 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 UCKL1Q9NWZ5 548 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 ATXN10Q9UBB4 475 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 PCOLCE2Q9UKZ9 415 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 SOX13Q9UN79 622 aa19.59■□□□□ 0.73
COL9A3-204ENST00000463487 OAS3Q9Y6K5 1087 aaKnown RBP19.59■□□□□ 0.73
COL9A3-204ENST00000463487 ASCC3Q8N3C0 2202 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms