RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 MXRA7P84157 204 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 ECT2LQ008S8 904 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 RAD51Q06609 339 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 NFATC2Q13469 925 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 GEN1Q17RS7 908 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 KHDC1Q4VXA5 237 aaKnown RBP12.72□□□□□ -0.37
VAPB-203ENST00000463370 TCEAL5Q5H9L2 206 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 METTL21CQ5VZV1 264 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 GPR26Q8NDV2 337 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 GRIN3AQ8TCU5 1115 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 KCNJ9Q92806 393 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 ECHDC3Q96DC8 303 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 LINGO1Q96FE5 620 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 MAELQ96JY0 434 aaKnown RBP12.72□□□□□ -0.37
VAPB-203ENST00000463370 THTPAQ9BU02 230 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 ABCG8Q9H221 673 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 MTG2Q9H4K7 406 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 CDH22Q9UJ99 828 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 TRMT6Q9UJA5 497 aaKnown RBP12.72□□□□□ -0.37
VAPB-203ENST00000463370 RNF112Q9ULX5 631 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 MYOFQ9NZM1 2061 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 SUPT3HB4E1H0 165 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 SLCO1B7G3V0H7 640 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 CHUKO15111 745 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 VPS26AO75436 327 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 SUPT3HO75486 399 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 SORBS2O94875 1100 aaKnown RBP12.71□□□□□ -0.37
VAPB-203ENST00000463370 FGF19O95750 216 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 HNRNPA1P09651 372 aaKnown RBP eCLIP12.71□□□□□ -0.37
VAPB-203ENST00000463370 CHRM1P11229 460 aaPredicted RBP12.71□□□□□ -0.37
VAPB-203ENST00000463370 COX4I1P13073 169 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 GFAPP14136 432 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 AGTR2P50052 363 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 ERFP50548 548 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 HK2P52789 917 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 HK3P52790 923 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 FOXA1P55317 472 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 MESP2Q0VG99 397 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 CHRNA6Q15825 494 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 AARS2Q5JTZ9 985 aaKnown RBP12.71□□□□□ -0.37
VAPB-203ENST00000463370 LRRC66Q68CR7 880 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 ACAD11Q709F0 780 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 SUGP1Q8IWZ8 645 aaKnown RBP12.71□□□□□ -0.37
VAPB-203ENST00000463370 ESAMQ96AP7 390 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 FAM161BQ96MY7 647 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 SUV39H2Q9H5I1 410 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 ASB1Q9Y576 335 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 PTGDR2Q9Y5Y4 395 aa12.71□□□□□ -0.37
VAPB-203ENST00000463370 E5RI56 91 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 H0Y3Z8 333 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 CDK14O94921 469 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 ESR1P03372 595 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 PIK3R1P27986 724 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 ADARP55265 1226 aaKnown RBP12.71□□□□□ -0.38
VAPB-203ENST00000463370 PTSQ03393 145 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 CARD16Q5EG05 197 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 ACSBG2Q5FVE4 666 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 TMC5Q6UXY8 1006 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 ULK2Q8IYT8 1036 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 OR2A12Q8NGT7 310 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 STAG3L4Q8TBR4 150 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 ISG20Q96AZ6 181 aaKnown RBP12.71□□□□□ -0.38
VAPB-203ENST00000463370 KCNA7Q96RP8 456 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 EML4Q9HC35 981 aaKnown RBP12.71□□□□□ -0.38
VAPB-203ENST00000463370 SLC25A13Q9UJS0 675 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 VPS9D1Q9Y2B5 631 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 MRPS23Q9Y3D9 190 aaKnown RBP12.71□□□□□ -0.38
VAPB-203ENST00000463370 RWDD3Q9Y3V2 267 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 TRAF6Q9Y4K3 522 aa12.71□□□□□ -0.38
VAPB-203ENST00000463370 COPG1Q9Y678 874 aaKnown RBP12.71□□□□□ -0.38
VAPB-203ENST00000463370 A0A088AWK7 358 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 GLYATL1P3A0A0U1RQE8 302 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 TTC34A8MYJ7 566 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 PRMT5O14744 637 aaPredicted RBP12.7□□□□□ -0.38
VAPB-203ENST00000463370 WFS1O76024 890 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 PYGLP06737 847 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 EEF1DP29692 281 aaKnown RBP12.7□□□□□ -0.38
VAPB-203ENST00000463370 VIPR2P41587 438 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 ILF2Q12905 390 aaKnown RBP12.7□□□□□ -0.38
VAPB-203ENST00000463370 WASHC2DQ5SRD0 308 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 ELMSAN1Q6PJG2 1045 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 METTL3Q86U44 580 aaKnown RBP12.7□□□□□ -0.38
VAPB-203ENST00000463370 C12orf40Q86WS4 652 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 EFCAB3Q8N7B9 438 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 MAGEC3Q8TD91 643 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 TRPC4APQ8TEL6 797 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 ASIC4Q96FT7 647 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 SCRN2Q96FV2 425 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 C3orf30Q96M34 536 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 CIPCQ9C0C6 399 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 C1orf21Q9H246 121 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 SLC7A8Q9UHI5 535 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 ATP6AP2A0A1C7CYW4 349 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 MAGEC1O60732 1142 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 ATP6AP2O75787 350 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 TM7SF2O76062 418 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 ITGAXP20702 1163 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 CCND1P24385 295 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 PPARGP37231 505 aaPredicted RBP12.7□□□□□ -0.38
VAPB-203ENST00000463370 ATP6V0D1P61421 351 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms