RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 POLR1CO15160 346 aaPredicted RBP15.51■□□□□ 0.07
SND1-203ENST00000463020 CLDN7O95471 211 aa15.51■□□□□ 0.07
SND1-203ENST00000463020 ASMTLO95671 621 aa15.51■□□□□ 0.07
SND1-203ENST00000463020 PRLP01236 227 aa15.51■□□□□ 0.07
SND1-203ENST00000463020 TRBC1P01850 177 aa15.51■□□□□ 0.07
SND1-203ENST00000463020 GNLYP22749 145 aa15.51■□□□□ 0.07
SND1-203ENST00000463020 DLSTP36957 453 aa15.51■□□□□ 0.07
SND1-203ENST00000463020 LEPRP48357 1165 aaKnown RBP15.51■□□□□ 0.07
SND1-203ENST00000463020 DSC2Q02487 901 aa15.51■□□□□ 0.07
SND1-203ENST00000463020 LRP8Q14114 963 aa15.51■□□□□ 0.07
SND1-203ENST00000463020 LRRC8AQ8IWT6 810 aa15.51■□□□□ 0.07
SND1-203ENST00000463020 HSPH1Q92598 858 aa15.51■□□□□ 0.07
SND1-203ENST00000463020 EIF3CQ99613 913 aaKnown RBP15.51■□□□□ 0.07
SND1-203ENST00000463020 TRIM55Q9BYV6 548 aa15.51■□□□□ 0.07
SND1-203ENST00000463020 ULBP3Q9BZM4 244 aa15.51■□□□□ 0.07
SND1-203ENST00000463020 KCTD5Q9NXV2 234 aa15.51■□□□□ 0.07
SND1-203ENST00000463020 LIMA1Q9UHB6 759 aaKnown RBP15.51■□□□□ 0.07
SND1-203ENST00000463020 TLK1Q9UKI8 766 aa15.51■□□□□ 0.07
SND1-203ENST00000463020 ZNF106Q9H2Y7 1883 aaKnown RBP15.5■□□□□ 0.07
SND1-203ENST00000463020 TNRC6AQ8NDV7 1962 aaKnown RBP15.5■□□□□ 0.07
SND1-203ENST00000463020 A0A1W2PQ67 120 aa15.5■□□□□ 0.07
SND1-203ENST00000463020 KIF1CO43896 1103 aaKnown RBP15.5■□□□□ 0.07
SND1-203ENST00000463020 TIAF1O95411 115 aa15.5■□□□□ 0.07
SND1-203ENST00000463020 HSPA9P38646 679 aaKnown RBP15.5■□□□□ 0.07
SND1-203ENST00000463020 UBASH3AP57075 661 aa15.5■□□□□ 0.07
SND1-203ENST00000463020 UBE2IP63279 158 aaKnown RBP15.5■□□□□ 0.07
SND1-203ENST00000463020 UBXN1Q04323 297 aa15.5■□□□□ 0.07
SND1-203ENST00000463020 DPYSL2Q16555 572 aa15.5■□□□□ 0.07
SND1-203ENST00000463020 TMCO3Q6UWJ1 677 aa15.5■□□□□ 0.07
SND1-203ENST00000463020 ASB18Q6ZVZ8 466 aa15.5■□□□□ 0.07
SND1-203ENST00000463020 ZNF765Q7L2R6 523 aa15.5■□□□□ 0.07
SND1-203ENST00000463020 ATPAF2Q8N5M1 289 aa15.5■□□□□ 0.07
SND1-203ENST00000463020 ZPBPQ9BS86 351 aa15.5■□□□□ 0.07
SND1-203ENST00000463020 ZWILCHQ9H900 591 aa15.5■□□□□ 0.07
SND1-203ENST00000463020 AKIRIN1Q9H9L7 192 aaPredicted RBP15.5■□□□□ 0.07
SND1-203ENST00000463020 PLEKHB1Q9UF11 243 aaPredicted RBP15.5■□□□□ 0.07
SND1-203ENST00000463020 CHKBQ9Y259 395 aa15.5■□□□□ 0.07
SND1-203ENST00000463020 CDC14CA4D256 554 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 SEMA7AO75326 666 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 C9P02748 559 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 CD48P09326 243 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 TYRP1P17643 537 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 CDK11BP21127 795 aaKnown RBP15.49■□□□□ 0.07
SND1-203ENST00000463020 SEPHS1P49903 392 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 EPHA4P54764 986 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 FOXM1Q08050 763 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 NIPAL4Q0D2K0 466 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 MMRN1Q13201 1228 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 CRTC2Q53ET0 693 aaPredicted RBP15.49■□□□□ 0.07
SND1-203ENST00000463020 MARC1Q5VT66 337 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 CAPRIN2Q6IMN6 1127 aaKnown RBP15.49■□□□□ 0.07
SND1-203ENST00000463020 TCTN3Q6NUS6 607 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 ZNF571Q7Z3V5 609 aaPredicted RBP15.49■□□□□ 0.07
SND1-203ENST00000463020 CPNE8Q86YQ8 564 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 LZTR1Q8N653 840 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 ESX1Q8N693 406 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 TEX26Q8N6G2 289 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 EXD1Q8NHP7 514 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 EID2BQ96D98 161 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 C9orf72Q96LT7 481 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 PLEKHG4BQ96PX9 1271 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 ERGIC2Q96RQ1 377 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 BRD8Q9H0E9 1235 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 LRRC4CQ9HCJ2 640 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 PCDH18Q9HCL0 1135 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.49■□□□□ 0.07
SND1-203ENST00000463020 CPNE7Q9UBL6 633 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 SLC23A2Q9UGH3 650 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 KCTD3Q9Y597 815 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 ADGRG1Q9Y653 693 aa15.49■□□□□ 0.07
SND1-203ENST00000463020 H3BRJ5 948 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 DDX3XO00571 662 aaKnown RBP eCLIP15.48■□□□□ 0.076e-62■■■□□ 15.1
SND1-203ENST00000463020 MFSD11O43934 449 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 KATNA1O75449 491 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 KIAA0754O94854 1291 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 ANKRD34CP0C6C1 535 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 RARAP10276 462 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 SKILP12757 684 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 F3P13726 295 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 FERP16591 822 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 ZNF8P17098 575 aaPredicted RBP15.48■□□□□ 0.07
SND1-203ENST00000463020 IL4RP24394 825 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 PPP1CAP62136 330 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 PEX6Q13608 980 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 MAP7Q14244 749 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 PLA2G4EQ3MJ16 856 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 HENMT1Q5T8I9 393 aaKnown RBP15.48■□□□□ 0.07
SND1-203ENST00000463020 CPZQ66K79 652 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 C6orf15Q6UXA7 325 aaPredicted RBP15.48■□□□□ 0.07
SND1-203ENST00000463020 LYSMD3Q7Z3D4 306 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 NLRP8Q86W28 1048 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 PSTKQ8IV42 348 aaKnown RBP15.48■□□□□ 0.07
SND1-203ENST00000463020 C17orf53Q8N3J3 647 aaPredicted RBP15.48■□□□□ 0.07
SND1-203ENST00000463020 TEX19Q8NA77 164 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 ARRDC2Q8TBH0 407 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 BTBD6Q96KE9 485 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 TGM7Q96PF1 710 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 OR6C1Q96RD1 312 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 EFHD1Q9BUP0 239 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 TDRD1Q9BXT4 1180 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms