RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 DDX47Q9H0S4 455 aaKnown RBP7.5□□□□□ -1.21
UBE4B-204ENST00000462658 SLITRK6Q9H5Y7 841 aa7.5□□□□□ -1.21
UBE4B-204ENST00000462658 DHX35Q9H5Z1 703 aaKnown RBP7.5□□□□□ -1.21
UBE4B-204ENST00000462658 LRRC19Q9H756 370 aa7.5□□□□□ -1.21
UBE4B-204ENST00000462658 FAM204AQ9H8W3 233 aa7.5□□□□□ -1.21
UBE4B-204ENST00000462658 NMUR1Q9HB89 426 aa7.5□□□□□ -1.21
UBE4B-204ENST00000462658 CYP4F11Q9HBI6 524 aa7.5□□□□□ -1.21
UBE4B-204ENST00000462658 HOMER3Q9NSC5 361 aa7.5□□□□□ -1.21
UBE4B-204ENST00000462658 PIGVQ9NUD9 493 aa7.5□□□□□ -1.21
UBE4B-204ENST00000462658 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.5□□□□□ -1.21
UBE4B-204ENST00000462658 GPATCH2LQ9NWQ4 482 aa7.5□□□□□ -1.21
UBE4B-204ENST00000462658 DDIT4Q9NX09 232 aa7.5□□□□□ -1.21
UBE4B-204ENST00000462658 VSX1Q9NZR4 365 aaPredicted RBP7.5□□□□□ -1.21
UBE4B-204ENST00000462658 FZD10Q9ULW2 581 aa7.5□□□□□ -1.21
UBE4B-204ENST00000462658 MAFFQ9ULX9 164 aa7.5□□□□□ -1.21
UBE4B-204ENST00000462658 CDYLQ9Y232 598 aa7.5□□□□□ -1.21
UBE4B-204ENST00000462658 LZTS1Q9Y250 596 aa7.5□□□□□ -1.21
UBE4B-204ENST00000462658 MYRFQ9Y2G1 1151 aa7.5□□□□□ -1.21
UBE4B-204ENST00000462658 ATG2AQ2TAZ0 1938 aa7.5□□□□□ -1.21
UBE4B-204ENST00000462658 NLRC5Q86WI3 1866 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 A0A088AWK7 358 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 ZNF785A8K8V0 405 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 RNASET2O00584 256 aaKnown RBP7.49□□□□□ -1.21
UBE4B-204ENST00000462658 PRRG1O14668 218 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 TEX28O15482 410 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 CNPP09543 421 aaKnown RBP7.49□□□□□ -1.21
UBE4B-204ENST00000462658 SPATA31D3P0C874 917 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 ATF6P18850 670 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 HDCP19113 662 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 MCM3P25205 808 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 ADRA1BP35368 520 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 COILP38432 576 aaPredicted RBP7.49□□□□□ -1.21
UBE4B-204ENST00000462658 FNTAP49354 379 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 CXCR3P49682 368 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 AIF1P55008 147 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 TAF10Q12962 218 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 SNX1Q13596 522 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 DHX34Q14147 1143 aaKnown RBP7.49□□□□□ -1.21
UBE4B-204ENST00000462658 DPYSL3Q14195 570 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 DPYSL2Q16555 572 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 CCNG2Q16589 344 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 ARL13BQ3SXY8 428 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 FNDC7Q5VTL7 733 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 IGFL4Q6B9Z1 124 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 WDR93Q6P2C0 686 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 TTC27Q6P3X3 843 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 CCDC137Q6PK04 289 aaKnown RBP7.49□□□□□ -1.21
UBE4B-204ENST00000462658 SPATA31D4Q6ZUB0 917 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 BBS12Q6ZW61 710 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 TAC4Q86UU9 113 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 VSIG1Q86XK7 387 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 PSTKQ8IV42 348 aaKnown RBP7.49□□□□□ -1.21
UBE4B-204ENST00000462658 CCDC105Q8IYK2 499 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 FAM71BQ8TC56 605 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 SPPL3Q8TCT6 385 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 DQX1Q8TE96 717 aaKnown RBP7.49□□□□□ -1.21
UBE4B-204ENST00000462658 POF1BQ8WVV4 589 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 ANKRD7Q92527 254 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 TIFAQ96CG3 184 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 RUNDC3BQ96NL0 473 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 GUCD1Q96NT3 240 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 RNF157Q96PX1 679 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 PNKPQ96T60 521 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 C17orf80Q9BSJ5 609 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 TTLL2Q9BWV7 592 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 MAGEB5Q9BZ81 275 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 DCLK3Q9C098 648 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 TTYH1Q9H313 450 aaPredicted RBP7.49□□□□□ -1.21
UBE4B-204ENST00000462658 PLEKHA4Q9H4M7 779 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 WDR6Q9NNW5 1121 aaKnown RBP7.49□□□□□ -1.21
UBE4B-204ENST00000462658 ALG13Q9NP73 1137 aaKnown RBP7.49□□□□□ -1.21
UBE4B-204ENST00000462658 TLR8Q9NR97 1041 aaKnown RBP7.49□□□□□ -1.21
UBE4B-204ENST00000462658 TMEM51Q9NW97 253 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 OSER1Q9NX31 292 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 GPRC5BQ9NZH0 403 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 AMACRQ9UHK6 382 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 FBXW11Q9UKB1 542 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 RAB21Q9UL25 225 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 MAGED2Q9UNF1 606 aaPredicted RBP7.49□□□□□ -1.21
UBE4B-204ENST00000462658 R3HDM2Q9Y2K5 976 aaKnown RBP7.49□□□□□ -1.21
UBE4B-204ENST00000462658 YIPF1Q9Y548 306 aa7.49□□□□□ -1.21
UBE4B-204ENST00000462658 ZNF487B1APH4 448 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 E9PLN8 166 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 C5orf67F2Z3F1 127 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 TTI1O43156 1089 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 IRAK2O43187 625 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 CST8O60676 142 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 HEXIM1O94992 359 aaKnown RBP7.48□□□□□ -1.21
UBE4B-204ENST00000462658 IGLV3-25P01717 112 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 RB1P06400 928 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 CSH1P0DML2 217 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 CSH2P0DML3 217 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 RARGP13631 454 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 MYOGP15173 224 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 TNFRSF1AP19438 455 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 IL4RP24394 825 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 KLRC2P26717 231 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 KCNJ1P48048 391 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 DYNLT1P63172 113 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 DR1Q01658 176 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms