RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 TAZQ16635 292 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 PARP6Q2NL67 630 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 SIRPB2Q5JXA9 342 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 ANKRD20A2Q5SQ80 823 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 HENMT1Q5T8I9 393 aaKnown RBP8.87□□□□□ -0.99
DDX39B-216ENST00000462421 ANKRD20A1Q5TYW2 823 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 ANKRD20A3Q5VUR7 823 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 KLHL35Q6PF15 583 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 CRTC3Q6UUV7 619 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 FAM151BQ6UXP7 276 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 TMC3Q7Z5M5 1100 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 TRIM74Q86UV6 250 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 GAS2L3Q86XJ1 694 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 BEND7Q8N7W2 519 aaPredicted RBP8.87□□□□□ -0.99
DDX39B-216ENST00000462421 CNTD1Q8N815 330 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 FAM71DQ8N9W8 422 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 KCNE4Q8WWG9 221 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 ZNF514Q96K75 400 aaPredicted RBP8.87□□□□□ -0.99
DDX39B-216ENST00000462421 NAP1L3Q99457 506 aaPredicted RBP8.87□□□□□ -0.99
DDX39B-216ENST00000462421 EPB41L1Q9H4G0 881 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 TRIM39Q9HCM9 518 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 BPIFA1Q9NP55 256 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 HOMER3Q9NSC5 361 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 RAXQ9Y2V3 346 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 DUSP10Q9Y6W6 482 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 SPTBN2O15020 2390 aa8.87□□□□□ -0.99
DDX39B-216ENST00000462421 DCHS1Q96JQ0 3298 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 GOLGA6L10A0A0M3HER8 536 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 SRRM3A6NNA2 597 aaPredicted RBP8.86□□□□□ -0.99
DDX39B-216ENST00000462421 ERI2A8K979 691 aaKnown RBP8.86□□□□□ -0.99
DDX39B-216ENST00000462421 AP3B1O00203 1094 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 PFDN6O15212 129 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 KDM1AO60341 852 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 KCNJ13O60928 360 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 ECEL1O95672 775 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 CPNE6O95741 557 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 PRLP01236 227 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 MMP2P08253 660 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 PYGMP11217 842 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 AMD1P17707 334 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 IDSP22304 550 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 AK4P27144 223 aaPredicted RBP8.86□□□□□ -0.99
DDX39B-216ENST00000462421 PSMB4P28070 264 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 FDFT1P37268 417 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 LSSP48449 732 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 CLDN6P56747 220 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 ERVPABLB-1P60509 514 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 CCL7P80098 99 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 SARNPP82979 210 aaKnown RBP8.86□□□□□ -0.99
DDX39B-216ENST00000462421 WASHC5Q12768 1159 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 HLTFQ14527 1009 aaKnown RBP eCLIP8.86□□□□□ -0.992e-9■□□□□ 9.8
DDX39B-216ENST00000462421 RTP5Q14D33 572 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 TAF1AQ15573 450 aaPredicted RBP8.86□□□□□ -0.99
DDX39B-216ENST00000462421 TBC1D25Q3MII6 688 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 PLA2G4EQ3MJ16 856 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 PYCR3Q53H96 274 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 PERM1Q5SV97 790 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 ARMC6Q6NXE6 501 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 C4orf22Q6V702 233 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 RAB11FIP2Q7L804 512 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 RBM12BQ8IXT5 1001 aaKnown RBP8.86□□□□□ -0.99
DDX39B-216ENST00000462421 LRRC57Q8N9N7 239 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 ZSCAN1Q8NBB4 408 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 GPR156Q8NFN8 814 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 ATXN7L3BQ96GX2 97 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 VPS35Q96QK1 796 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 TSSK1BQ9BXA7 367 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 LACRTQ9GZZ8 138 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 KLC4Q9NSK0 619 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 NFKBIL1Q9UBC1 381 aaPredicted RBP8.86□□□□□ -0.99
DDX39B-216ENST00000462421 PACSIN2Q9UNF0 486 aaPredicted RBP8.86□□□□□ -0.99
DDX39B-216ENST00000462421 LHX6Q9UPM6 363 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 SATB2Q9UPW6 733 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 KCNK6Q9Y257 313 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 DNAJC16Q9Y2G8 782 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 ADGRG1Q9Y653 693 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 RNF215Q9Y6U7 377 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 DNAH14Q0VDD8 3507 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 CHD5Q8TDI0 1954 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 LAMA1P25391 3075 aa8.86□□□□□ -0.99
DDX39B-216ENST00000462421 LOC285095A0A1B0GVY8 99 aa8.85□□□□□ -0.99
DDX39B-216ENST00000462421 RCCD1A6NED2 376 aa8.85□□□□□ -0.99
DDX39B-216ENST00000462421 QSOX1O00391 747 aa8.85□□□□□ -0.99
DDX39B-216ENST00000462421 PLD2O14939 933 aa8.85□□□□□ -0.99
DDX39B-216ENST00000462421 NUAK1O60285 661 aa8.85□□□□□ -0.99
DDX39B-216ENST00000462421 TNFSF15O95150 251 aa8.85□□□□□ -0.99
DDX39B-216ENST00000462421 PRAMEF1O95521 474 aa8.85□□□□□ -0.99
DDX39B-216ENST00000462421 ITGA2BP08514 1039 aa8.85□□□□□ -0.99
DDX39B-216ENST00000462421 BPIP17213 487 aa8.85□□□□□ -0.99
DDX39B-216ENST00000462421 PBLDP30039 288 aaPredicted RBP8.85□□□□□ -0.99
DDX39B-216ENST00000462421 ARL4DP49703 201 aa8.85□□□□□ -0.99
DDX39B-216ENST00000462421 ATP1A2P50993 1020 aa8.85□□□□□ -0.99
DDX39B-216ENST00000462421 MAZP56270 477 aaKnown RBP8.85□□□□□ -0.99
DDX39B-216ENST00000462421 CCDC173Q0VFZ6 552 aa8.85□□□□□ -0.99
DDX39B-216ENST00000462421 NFATC2Q13469 925 aa8.85□□□□□ -0.99
DDX39B-216ENST00000462421 TRA2AQ13595 282 aaKnown RBP eCLIP8.85□□□□□ -0.99
DDX39B-216ENST00000462421 GSE1Q14687 1217 aa8.85□□□□□ -0.99
DDX39B-216ENST00000462421 PLCL1Q15111 1095 aa8.85□□□□□ -0.99
DDX39B-216ENST00000462421 SEPT7Q16181 437 aaKnown RBP8.85□□□□□ -0.99
DDX39B-216ENST00000462421 CDCP2Q5VXM1 449 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms