RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 NTN4Q9HB63 628 aa18.34■□□□□ 0.53
HPS3-204ENST00000462030 AIG1Q9NVV5 245 aa18.34■□□□□ 0.53
HPS3-204ENST00000462030 IQCA1LA6NCM1 817 aa18.33■□□□□ 0.53
HPS3-204ENST00000462030 SUPT3HB4E1H0 165 aa18.33■□□□□ 0.53
HPS3-204ENST00000462030 EEDO75530 441 aaKnown RBP18.33■□□□□ 0.53
HPS3-204ENST00000462030 GJB3O75712 270 aa18.33■□□□□ 0.53
HPS3-204ENST00000462030 BCL10O95999 233 aa18.33■□□□□ 0.53
HPS3-204ENST00000462030 GOT2P00505 430 aaKnown RBP18.33■□□□□ 0.53
HPS3-204ENST00000462030 HAPLN1P10915 354 aaPredicted RBP18.33■□□□□ 0.53
HPS3-204ENST00000462030 TCF3P15923 654 aa18.33■□□□□ 0.53
HPS3-204ENST00000462030 FUT4P22083 530 aa18.33■□□□□ 0.53
HPS3-204ENST00000462030 TMBIM6P55061 237 aa18.33■□□□□ 0.53
HPS3-204ENST00000462030 SPATS1Q496A3 300 aa18.33■□□□□ 0.53
HPS3-204ENST00000462030 TIGD5Q53EQ6 642 aa18.33■□□□□ 0.53
HPS3-204ENST00000462030 PNPT1Q8TCS8 783 aaKnown RBP18.33■□□□□ 0.53
HPS3-204ENST00000462030 LPPQ93052 612 aa18.33■□□□□ 0.53
HPS3-204ENST00000462030 CNDP2Q96KP4 475 aaKnown RBP18.33■□□□□ 0.53
HPS3-204ENST00000462030 TMEM209Q96SK2 561 aa18.33■□□□□ 0.53
HPS3-204ENST00000462030 IKZF3Q9UKT9 509 aa18.33■□□□□ 0.53
HPS3-204ENST00000462030 PCDHGA11Q9Y5H2 935 aa18.33■□□□□ 0.53
HPS3-204ENST00000462030 CCDC154A6NI56 674 aa18.33■□□□□ 0.52
HPS3-204ENST00000462030 H0YAE9 185 aa18.33■□□□□ 0.52
HPS3-204ENST00000462030 SYNCRIPO60506 623 aaKnown RBP18.33■□□□□ 0.52
HPS3-204ENST00000462030 CRCPO75575 148 aa18.33■□□□□ 0.52
HPS3-204ENST00000462030 SULT1C4O75897 302 aa18.33■□□□□ 0.52
HPS3-204ENST00000462030 RSL1D1O76021 490 aaKnown RBP18.33■□□□□ 0.52
HPS3-204ENST00000462030 PRSS56P0CW18 603 aa18.33■□□□□ 0.52
HPS3-204ENST00000462030 LCP2Q13094 533 aa18.33■□□□□ 0.52
HPS3-204ENST00000462030 BPIFB1Q8TDL5 484 aa18.33■□□□□ 0.52
HPS3-204ENST00000462030 HMCESQ96FZ2 354 aa18.33■□□□□ 0.52
HPS3-204ENST00000462030 CYP2S1Q96SQ9 504 aa18.33■□□□□ 0.52
HPS3-204ENST00000462030 UXTQ9UBK9 157 aaPredicted RBP18.33■□□□□ 0.52
HPS3-204ENST00000462030 GNPTGQ9UJJ9 305 aa18.33■□□□□ 0.52
HPS3-204ENST00000462030 C1orf232A0A0U1RR37 186 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 SOBPA7XYQ1 873 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 UPK1AO00322 258 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 ADAM23O75077 832 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 PRR35P0CG20 571 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 PCSK1P29120 753 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 ARSFP54793 590 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 EEFSECP57772 596 aaKnown RBP18.32■□□□□ 0.52
HPS3-204ENST00000462030 RALGPS2Q86X27 583 aaPredicted RBP18.32■□□□□ 0.52
HPS3-204ENST00000462030 SFRP1Q8N474 314 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 TMEM199Q8N511 208 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 TRUB1Q8WWH5 349 aaKnown RBP18.32■□□□□ 0.52
HPS3-204ENST00000462030 NEURL2Q9BR09 285 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 BDH2Q9BUT1 245 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 TRNAU1APQ9NX07 287 aaKnown RBP18.32■□□□□ 0.52
HPS3-204ENST00000462030 ARL5AQ9Y689 179 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 CFAP99D6REC4 459 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 ATXN1LP0C7T5 689 aaKnown RBP18.32■□□□□ 0.52
HPS3-204ENST00000462030 IL7RP16871 459 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 JUNBP17275 347 aaPredicted RBP18.32■□□□□ 0.52
HPS3-204ENST00000462030 IL12AP29459 219 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 GJA5P36382 358 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 ADAM17P78536 824 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 BFSP2Q13515 415 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 SPIDRQ14159 915 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 MFSD10Q14728 455 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 AASDHQ4L235 1098 aaPredicted RBP18.32■□□□□ 0.52
HPS3-204ENST00000462030 LDLRAP1Q5SW96 308 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 BROXQ5VW32 411 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 DPP9Q86TI2 863 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 RIMKLAQ8IXN7 391 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 ING2Q9H160 280 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 SMOC2Q9H3U7 446 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 AGO3Q9H9G7 860 aaKnown RBP18.32■□□□□ 0.52
HPS3-204ENST00000462030 LTB4R2Q9NPC1 389 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 LEF1Q9UJU2 399 aaPredicted RBP18.32■□□□□ 0.52
HPS3-204ENST00000462030 SLC30A1Q9Y6M5 507 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 DNAH12Q6ZR08 3092 aa18.32■□□□□ 0.52
HPS3-204ENST00000462030 CD3EAPO15446 510 aaKnown RBP18.31■□□□□ 0.52
HPS3-204ENST00000462030 GLP2RO95838 553 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 PCNAP12004 261 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 HTR7P34969 479 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 RENBPP51606 427 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 MARC1Q5VT66 337 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 FBXO39Q8N4B4 442 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 OR2T11Q8NH01 316 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 RHEBL1Q8TAI7 183 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 TSPEARQ8WU66 669 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 TMBIM1Q969X1 311 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 RIC8BQ9NVN3 520 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 ERGIC3Q9Y282 383 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 CCDC162PA2VCL2 907 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 SLC22A3O75751 556 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 CNTN5O94779 1100 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 THP07101 528 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 HTR1EP28566 365 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 SUOXP51687 545 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 POLR2JP52435 117 aaKnown RBP18.31■□□□□ 0.52
HPS3-204ENST00000462030 CRYBB1P53674 252 aaPredicted RBP18.31■□□□□ 0.52
HPS3-204ENST00000462030 KCNC4Q03721 635 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 ITGADQ13349 1161 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 CYP2A13Q16696 494 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 PIK3R6Q5UE93 754 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 EGFLAMQ63HQ2 1017 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 GLYATQ6IB77 296 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 SLC2A7Q6PXP3 512 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 SPATA19Q7Z5L4 167 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms