RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-208	ENST00000461578	DDAH2	O95865	285 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	PYGL	P06737	847 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	EPHB1	P54762	984 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	INPP5J	Q15735	1006 aa	Predicted RBP	13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	ZNF765	Q7L2R6	523 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	MCOLN2	Q8IZK6	566 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	PLEKHG4B	Q96PX9	1271 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	EIF3C	Q99613	913 aa	Known RBP	13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	AGPAT1	Q99943	283 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	MFRP	Q9BY79	579 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	ZNF768	Q9H5H4	540 aa	Known RBP	13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	ARFGAP3	Q9NP61	516 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	NT5M	Q9NPB1	228 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	LHX9	Q9NQ69	397 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	ACSS2	Q9NR19	701 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	ETNK2	Q9NVF9	386 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	VPS18	Q9P253	973 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	PPIL1	Q9Y3C6	166 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	SLC30A1	Q9Y6M5	507 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	PRPSAP2	O60256	369 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	CLDN7	O95471	211 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	ZNF30	P17039	623 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	AMPD1	P23109	780 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	MMP13	P45452	471 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	STC1	P52823	247 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	UBE2I	P63279	158 aa	Known RBP	13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	ITK	Q08881	620 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	DPYS	Q14117	519 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	IL11RA	Q14626	422 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	PLA2G4E	Q3MJ16	856 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	CACHD1	Q5VU97	1274 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	FAM92B	Q6ZTR7	304 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	TMEM26	Q6ZUK4	368 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	PPP1R3B	Q86XI6	285 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	PHYKPL	Q8IUZ5	450 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	TRIM48	Q8IWZ4	208 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	SRRM1	Q8IYB3	904 aa	Known RBP	13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	NDUFAF2	Q8N183	169 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	NSMCE1	Q8WV22	266 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	KLC4	Q9NSK0	619 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	TAS2R14	Q9NYV8	317 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	CNOT6	Q9ULM6	557 aa	Known RBP	13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578	CENPE	Q02224	2701 aa		13.57	□□□□□ -0.24
PABPC4-208	ENST00000461578		A0A0J9YYE9	177 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	OR5K4	A6NMS3	321 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	FADS2P1	A8MWK0	482 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	TMCO5B	A8MYB1	307 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	GRID2	O43424	1007 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	MAFK	O60675	156 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	VIP	P01282	170 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	TRBC1	P01850	177 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	MT-ND3	P03897	115 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	FGF5	P12034	268 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	EEF1G	P26641	437 aa	Known RBP	13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	MIP	P30301	263 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	MAMLD1	Q13495	774 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	SEPT7	Q16181	437 aa	Known RBP	13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	ZNF648	Q5T619	568 aa	Predicted RBP	13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	MARC1	Q5VT66	337 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	CRYBG3	Q68DQ2	2970 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	ACAD10	Q6JQN1	1059 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	IRGC	Q6NXR0	463 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	NLRP8	Q86W28	1048 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	ATPAF2	Q8N5M1	289 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	RSC1A1	Q92681	617 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	TCTN2	Q96GX1	697 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	WDR24	Q96S15	920 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	TRIM7	Q9C029	511 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	BRD8	Q9H0E9	1235 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	ING2	Q9H160	280 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	ZWILCH	Q9H900	591 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	SLAMF7	Q9NQ25	335 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	ERRFI1	Q9UJM3	462 aa	Predicted RBP	13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	SIK3	Q9Y2K2	1263 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	CELSR2	Q9HCU4	2923 aa		13.56	□□□□□ -0.24
PABPC4-208	ENST00000461578	HIVEP3	Q5T1R4	2406 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	C21orf140	B9A014	251 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	FZD6	O60353	706 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	RNF8	O76064	485 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	RECK	O95980	971 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	ZNF8	P17098	575 aa	Predicted RBP	13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	TNFRSF8	P28908	595 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	SLC19A1	P41440	591 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	HCAR3	P49019	387 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	IL10RA	Q13651	578 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	UGT8	Q16880	541 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	SMTNL2	Q2TAL5	461 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	RALGPS1	Q5JS13	557 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	FKBP15	Q5T1M5	1219 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	JMJD6	Q6NYC1	403 aa	Predicted RBP	13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	CRTC3	Q6UUV7	619 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	TMCO3	Q6UWJ1	677 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	AVL9	Q8NBF6	648 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	SLC29A3	Q9BZD2	475 aa		13.55	□□□□□ -0.24

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