RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 FAM126BQ8IXS8 530 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 EFCAB3Q8N7B9 438 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 PLD5Q8N7P1 536 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ASCC1Q8N9N2 400 aaKnown RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 KLHDC9Q8NEP7 349 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 TRPV1Q8NER1 839 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 FBXO22Q8NEZ5 403 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 LRTOMTQ8WZ04 291 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 MRPS31Q92665 395 aaKnown RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ASB9Q96DX5 294 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 CERS2Q96G23 380 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 PCED1BQ96HM7 432 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 FUBP3Q96I24 572 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 PWWP2AQ96N64 755 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF347Q96SE7 839 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 SEPT5Q99719 369 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ACAT2Q9BWD1 397 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ACE2Q9BYF1 805 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 TRPV5Q9NQA5 729 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 RGS18Q9NS28 235 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 INTS10Q9NVR2 710 aaKnown RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 SUCOQ9UBS9 1254 aaKnown RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 TJP2Q9UDY2 1190 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 IFRD1O00458 451 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 MOCS2O96007 188 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF24P17028 368 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 TPSB2P20231 275 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 RBL1P28749 1068 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 TPSAB1Q15661 275 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 CA9Q16790 459 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 SMU1Q2TAY7 513 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ZIK1Q3SY52 487 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 AARS2Q5JTZ9 985 aaKnown RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 CLEC20AQ6ZU45 233 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 KIAA0408Q6ZU52 694 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 OR56A4Q8NGH8 313 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 DPY30Q9C005 99 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 NDFIP2Q9NV92 336 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ATPIF1Q9UII2 106 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 PCDHGA3Q9Y5H0 932 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 DGKBQ9Y6T7 804 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 A0A0A0MRY4 1105 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 A0A1W2PQ45 241 aaPredicted RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 A0A1W2PQY0 241 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 FUOMA2VDF0 154 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 PTGESO14684 152 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 ZW10O43264 779 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 VPS26AO75436 327 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 EPN2O95208 641 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 CNPP09543 421 aaKnown RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 HIST1H2AGP0C0S8 130 aaPredicted RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 TSPAN19P0C672 248 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 CREB1P16220 341 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 MYL12AP19105 171 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 HIST1H2ADP20671 130 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 YWHAQP27348 245 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 IL1R2P27930 398 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 ADRA1BP35368 520 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 TUFMP49411 452 aaKnown RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 LSM3P62310 102 aaKnown RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 SOX4Q06945 474 aaPredicted RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 BNIP3Q12983 259 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 SIX1Q15475 284 aaPredicted RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 UPP1Q16831 310 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 RALGPS1Q5JS13 557 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 ANKS6Q68DC2 871 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 FAAH2Q6GMR7 532 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 AGMOQ6ZNB7 445 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 OSTM1Q86WC4 334 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 SPPL2BQ8TCT7 592 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 ASZ1Q8WWH4 475 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 STARD8Q92502 1023 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 NTAN1Q96AB6 310 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 HIST1H2AHQ96KK5 128 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF512Q96ME7 567 aaPredicted RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 SPATA13Q96N96 652 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF558Q96NG5 402 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 CSPG4P5Q96PW8 444 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 HIST1H2AJQ99878 128 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 H2AFJQ9BTM1 129 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 ROGDIQ9GZN7 287 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 KRCC1Q9NPI7 259 aaPredicted RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 CLN6Q9NWW5 311 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 CYTH4Q9UIA0 394 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 VPS4AQ9UN37 437 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 PCP4L1A6NKN8 68 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 FAM220BPB1ANY3 271 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 NDUFB5O43674 189 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 BNIP3LO60238 219 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 CST1P01037 141 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 C8BP07358 591 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 NAGLUP54802 743 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 FPGSQ05932 587 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 LGALS3BPQ08380 585 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 ELP6Q0PNE2 266 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 MYLK3Q32MK0 819 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 FAM26DQ5JW98 314 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 CASP12Q6UXS9 341 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 MON1AQ86VX9 555 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms