RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 DTX3LQ8TDB6 740 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 TCP10LQ8TDR4 215 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 HMGB4Q8WW32 186 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 ASZ1Q8WWH4 475 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 ATXN2LQ8WWM7 1075 aaKnown RBP5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 CCT6BQ92526 530 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 INPP5DQ92835 1189 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 TMEM159Q96B96 161 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 SPACA7Q96KW9 195 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 MAGEB18Q96M61 343 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 ZNF778Q96MU6 729 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 ASB2Q96Q27 587 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 MCCC1Q96RQ3 725 aaPredicted RBP5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 FAM129BQ96TA1 746 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 KLF6Q99612 283 aaPredicted RBP5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 GABRG3Q99928 467 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 MRPL57Q9BQC6 102 aaKnown RBP5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 TRIM56Q9BRZ2 755 aaKnown RBP5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 IER2Q9BTL4 223 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 DHRS4Q9BTZ2 278 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 PITPNM3Q9BZ71 974 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 MANSC1Q9H8J5 431 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 LMAN1LQ9HAT1 526 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 SGK2Q9HBY8 427 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 PREBQ9HCU5 417 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 ARHGEF3Q9NR81 526 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 LATS2Q9NRM7 1088 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 PHPT1Q9NRX4 125 aaPredicted RBP5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 SPATS2LQ9NUQ6 558 aaKnown RBP5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 IL1RAPL1Q9NZN1 696 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 RNF112Q9ULX5 631 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 CA14Q9ULX7 337 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 MMP17Q9ULZ9 603 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 MTO1Q9Y2Z2 717 aaKnown RBP5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 KCTD3Q9Y597 815 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 ANGPTL3Q9Y5C1 460 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 SPO11Q9Y5K1 396 aa5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 TCF20Q9UGU0 1960 aaKnown RBP5.8□□□□□ -1.48
RNU1-88P-201ENST00000459274 ANKRD12Q6UB98 2062 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 ZNF106Q9H2Y7 1883 aaKnown RBP5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 CKAP5Q14008 2032 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 A0A1W2PP55 124 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 WDR91A4D1P6 747 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 OR51F1A6NGY5 319 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 SRRM3A6NNA2 597 aaPredicted RBP5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 LOC730098B7Z3J9 87 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 GPR89AB7ZAQ6 455 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 CACNB4O00305 520 aaPredicted RBP5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 ARNTLO00327 626 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 CCL22O00626 93 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 NDUFAB1O14561 156 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 TOR1BO14657 336 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 FPGTO14772 594 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 AURKAO14965 403 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 RAD51BO15315 384 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 MID1O15344 667 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 VEGFDO43915 354 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 MMP20O60882 483 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 ZNF821O75541 412 aaPredicted RBP5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 CRCPO75575 148 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 PIAS1O75925 651 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 RECQL5O94762 991 aaPredicted RBP5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 CDK14O94921 469 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 CHEK2O96017 543 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 RPN2P04844 631 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 C2P06681 752 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 GPR89BP0CG08 455 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 CBSLP0DN79 551 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 ENO3P13929 434 aaPredicted RBP5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 EZRP15311 586 aaKnown RBP5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 BPIP17213 487 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 RPS3P23396 243 aaKnown RBP eCLIP5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 AKT2P31751 481 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 RPA3P35244 121 aaPredicted RBP5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 CBSP35520 551 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 MMP12P39900 470 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 P2RY2P41231 377 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 KIR2DL1P43626 348 aaPredicted RBP5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 THOP1P52888 689 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 MPP1Q00013 466 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 GUCY1A3Q02108 690 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 SLC18A2Q05940 514 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 CNTN1Q12860 1018 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 STX3Q13277 289 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 PTK2BQ14289 1009 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 CSHL1Q14406 222 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 KRT33BQ14525 404 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 CHRNA6Q15825 494 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 TYSND1Q2T9J0 566 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 LRRC73Q5JTD7 316 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 N4BP2L1Q5TBK1 243 aaPredicted RBP5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 CNSTQ6PJW8 725 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 Q6ZVL8 140 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 PARS2Q7L3T8 475 aaKnown RBP5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 SYT13Q7L8C5 426 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 CYP2U1Q7Z449 544 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 NLRP8Q86W28 1048 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 CACUL1Q86Y37 369 aa5.79□□□□□ -1.48
RNU1-88P-201ENST00000459274 CRLF3Q8IUI8 442 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms