RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 UGT1A3P35503 534 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 UGT1A5P35504 534 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 SPAM1P38567 509 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 ADCY8P40145 1251 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 POLD2P49005 469 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 HNRNPKP61978 463 aaKnown RBP eCLIP9.97□□□□□ -0.81
ATG4A-206ENST00000457035 DR1Q01658 176 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 PEX6Q13608 980 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 DHX34Q14147 1143 aaKnown RBP9.97□□□□□ -0.81
ATG4A-206ENST00000457035 ATP13A5Q4VNC0 1218 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 CCDC38Q502W7 563 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 RNASEH2BQ5TBB1 312 aaKnown RBP9.97□□□□□ -0.81
ATG4A-206ENST00000457035 N4BP2L1Q5TBK1 243 aaPredicted RBP9.97□□□□□ -0.81
ATG4A-206ENST00000457035 TRIM74Q86UV6 250 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 JAMLQ86YT9 394 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 HID1Q8IV36 788 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 PHACTR4Q8IZ21 702 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 RBFAQ8N0V3 343 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 KIF18AQ8NI77 898 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 ZNF398Q8TD17 642 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 STYXQ8WUJ0 223 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 GLYATL1Q969I3 302 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 CDKN2AIPNLQ96HQ2 116 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 DNAJC1Q96KC8 554 aaKnown RBP9.97□□□□□ -0.81
ATG4A-206ENST00000457035 ZNF778Q96MU6 729 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 VPS35Q96QK1 796 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 UGT1A7Q9HAW7 530 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 UGT1A10Q9HAW8 530 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 UGT1A8Q9HAW9 530 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 NLE1Q9NVX2 485 aaPredicted RBP9.97□□□□□ -0.81
ATG4A-206ENST00000457035 UCKL1Q9NWZ5 548 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 KLQ9UEF7 1012 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 FKBPLQ9UIM3 349 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 RIMKLBQ9ULI2 386 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 BTBD3Q9Y2F9 522 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 TMEM98Q9Y2Y6 226 aa9.97□□□□□ -0.81
ATG4A-206ENST00000457035 OAS3Q9Y6K5 1087 aaKnown RBP9.97□□□□□ -0.81
ATG4A-206ENST00000457035 TPRP12270 2363 aaKnown RBP9.96□□□□□ -0.81
ATG4A-206ENST00000457035 GLYATL1P3A0A0U1RQE8 302 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 PRSS38A1L453 326 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 HEATR9A2RTY3 570 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 AP3B1O00203 1094 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 CCL22O00626 93 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 DNALI1O14645 258 aaPredicted RBP9.96□□□□□ -0.82
ATG4A-206ENST00000457035 SCAMP1O15126 338 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 TP73O15350 636 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 GPR37O15354 613 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 DNAJC6O75061 913 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 CBFA2T3O75081 653 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 SRP72O76094 671 aaKnown RBP9.96□□□□□ -0.82
ATG4A-206ENST00000457035 SLC25A14O95258 325 aaPredicted RBP9.96□□□□□ -0.82
ATG4A-206ENST00000457035 RASGRP1O95267 797 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 TNFP01375 233 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 IVLP07476 585 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 MLNP12872 115 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 HADHAP40939 763 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 MAGEA3P43357 314 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 BLKP51451 505 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 ARSDP51689 593 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 SESN2P58004 480 aaPredicted RBP9.96□□□□□ -0.82
ATG4A-206ENST00000457035 MRPS25P82663 173 aaKnown RBP9.96□□□□□ -0.82
ATG4A-206ENST00000457035 SARNPP82979 210 aaKnown RBP9.96□□□□□ -0.82
ATG4A-206ENST00000457035 TMPRSS15P98073 1019 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 ACVR1Q04771 509 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 C2orf54Q08AI8 447 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 LAMB3Q13751 1172 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 TUBB2AQ13885 445 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 SKIDA1Q1XH10 827 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 KHDC1Q4VXA5 237 aaKnown RBP9.96□□□□□ -0.82
ATG4A-206ENST00000457035 PCID2Q5JVF3 399 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 ZNF648Q5T619 568 aaPredicted RBP9.96□□□□□ -0.82
ATG4A-206ENST00000457035 TSTD2Q5T7W7 516 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 FAM151BQ6UXP7 276 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 MICALCLQ6ZW33 695 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 RD3Q7Z3Z2 195 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 PPIL6Q8IXY8 311 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 OR13J1Q8NGT2 312 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 PDXPQ96GD0 296 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 TBATAQ96M53 351 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 CAMK1GQ96NX5 476 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 TRIM51Q9BSJ1 452 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 TUBB2BQ9BVA1 445 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 SLC13A1Q9BZW2 595 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 IL22Q9GZX6 179 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 CLPBQ9H078 707 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 SUDS3Q9H7L9 328 aaPredicted RBP9.96□□□□□ -0.82
ATG4A-206ENST00000457035 TRIM39Q9HCM9 518 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 CYP4F12Q9HCS2 524 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 CHRAC1Q9NRG0 131 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 BFARQ9NZS9 450 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 SLC2A6Q9UGQ3 507 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 ASIC3Q9UHC3 531 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 APPL1Q9UKG1 709 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 TCAF1Q9Y4C2 921 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 PCYT1BQ9Y5K3 369 aaPredicted RBP9.96□□□□□ -0.82
ATG4A-206ENST00000457035 MRFAP1Q9Y605 127 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 CSNK1G3Q9Y6M4 447 aa9.96□□□□□ -0.82
ATG4A-206ENST00000457035 CCDC78A2IDD5 438 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 FAM187AA6NFU0 413 aa9.95□□□□□ -0.82
ATG4A-206ENST00000457035 H3BM21 787 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms