RNA–Protein interactions for RNA: ENST00000455263.6

TP53-206, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-206ENST00000455263 ZYG11AQ6WRX3 759 aa12.23□□□□□ -0.45
TP53-206ENST00000455263 ALYREFQ86V81 257 aaKnown RBP12.23□□□□□ -0.45
TP53-206ENST00000455263 TERB1Q8NA31 727 aa12.23□□□□□ -0.45
TP53-206ENST00000455263 EEF1AKMT1Q8WVE0 214 aa12.23□□□□□ -0.45
TP53-206ENST00000455263 C7orf26Q96N11 449 aa12.23□□□□□ -0.45
TP53-206ENST00000455263 TCF12Q99081 682 aa12.23□□□□□ -0.45
TP53-206ENST00000455263 PHOX2BQ99453 314 aa12.23□□□□□ -0.45
TP53-206ENST00000455263 MRPL57Q9BQC6 102 aaKnown RBP12.23□□□□□ -0.45
TP53-206ENST00000455263 IKZF3Q9UKT9 509 aa12.23□□□□□ -0.45
TP53-206ENST00000455263 USH1CQ9Y6N9 552 aa12.23□□□□□ -0.45
TP53-206ENST00000455263 TCF20Q9UGU0 1960 aaKnown RBP12.23□□□□□ -0.45
TP53-206ENST00000455263 NCF1BA6NI72 391 aaPredicted RBP12.23□□□□□ -0.45
TP53-206ENST00000455263 NCF1CA8MVU1 366 aaPredicted RBP12.23□□□□□ -0.45
TP53-206ENST00000455263 TRIM16O95361 564 aa12.23□□□□□ -0.45
TP53-206ENST00000455263 NCF1P14598 390 aaPredicted RBP12.23□□□□□ -0.45
TP53-206ENST00000455263 HOXB8P17481 243 aaPredicted RBP12.23□□□□□ -0.45
TP53-206ENST00000455263 SERPINB3P29508 390 aa12.23□□□□□ -0.45
TP53-206ENST00000455263 ARL13AQ5H913 290 aaPredicted RBP12.23□□□□□ -0.45
TP53-206ENST00000455263 KLC3Q6P597 504 aa12.23□□□□□ -0.45
TP53-206ENST00000455263 DET1Q7L5Y6 550 aa12.23□□□□□ -0.45
TP53-206ENST00000455263 HSD11B1LQ7Z5J1 315 aa12.23□□□□□ -0.45
TP53-206ENST00000455263 GIMAP7Q8NHV1 300 aa12.23□□□□□ -0.45
TP53-206ENST00000455263 WRAP53Q9BUR4 548 aaKnown RBP12.23□□□□□ -0.45
TP53-206ENST00000455263 MYLK2Q9H1R3 596 aa12.23□□□□□ -0.45
TP53-206ENST00000455263 TRPV4Q9HBA0 871 aa12.23□□□□□ -0.45
TP53-206ENST00000455263 MBD1Q9UIS9 605 aaPredicted RBP12.23□□□□□ -0.45
TP53-206ENST00000455263 PAPLNO95428 1278 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 C1SP09871 688 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 PSMA3P25788 255 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 SPAM1P38567 509 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 ZBTB16Q05516 673 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 PDGFRLQ15198 375 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 OR4D1Q15615 310 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 TSNAXIP1Q2TAA8 658 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 TECRLQ5HYJ1 363 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 C9orf64Q5T6V5 341 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 LIPMQ5VYY2 423 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 PTRHD1Q6GMV3 140 aaKnown RBP12.22□□□□□ -0.45
TP53-206ENST00000455263 MMAAQ8IVH4 418 aaKnown RBP12.22□□□□□ -0.45
TP53-206ENST00000455263 CPNE9Q8IYJ1 553 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 PIWIL2Q8TC59 973 aaKnown RBP12.22□□□□□ -0.45
TP53-206ENST00000455263 RILPQ96NA2 401 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 MCCC1Q96RQ3 725 aaPredicted RBP12.22□□□□□ -0.45
TP53-206ENST00000455263 TRMT61BQ9BVS5 477 aaKnown RBP12.22□□□□□ -0.45
TP53-206ENST00000455263 TTYH1Q9H313 450 aaPredicted RBP12.22□□□□□ -0.45
TP53-206ENST00000455263 UTP6Q9NYH9 597 aaKnown RBP12.22□□□□□ -0.45
TP53-206ENST00000455263 APPL1Q9UKG1 709 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 FIS1Q9Y3D6 152 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 PIKFYVEQ9Y2I7 2098 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 NUP210Q8TEM1 1887 aaPredicted RBP12.22□□□□□ -0.45
TP53-206ENST00000455263 LRRC14BA6NHZ5 514 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 CDC7O00311 574 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 PRMT5O14744 637 aaPredicted RBP12.22□□□□□ -0.45
TP53-206ENST00000455263 KAT7O95251 611 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 EPHX1P07099 455 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 SRPRAP08240 638 aaKnown RBP12.22□□□□□ -0.45
TP53-206ENST00000455263 CD1DP15813 335 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 ITGALP20701 1170 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 GRK2P25098 689 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 IL12RB1P42701 662 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 PTGER3P43115 390 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 SEC13P55735 322 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 PFKPQ01813 784 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 ACAP2Q15057 778 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 ZNF805Q5CZA5 627 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 AARS2Q5JTZ9 985 aaKnown RBP12.22□□□□□ -0.45
TP53-206ENST00000455263 ZNF648Q5T619 568 aaPredicted RBP12.22□□□□□ -0.45
TP53-206ENST00000455263 BRAT1Q6PJG6 821 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 TRIM67Q6ZTA4 783 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 SNX20Q7Z614 316 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 SPATA16Q9BXB7 569 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 CLPBQ9H078 707 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 KLC4Q9NSK0 619 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 ARMCX1Q9P291 453 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 HCN2Q9UL51 889 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 COQ6Q9Y2Z9 468 aa12.22□□□□□ -0.45
TP53-206ENST00000455263 MYO10Q9HD67 2058 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 LAMA1P25391 3075 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 UBXN8O00124 270 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 CHUKO15111 745 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 PFDN6O15212 129 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 SIX3O95343 332 aaPredicted RBP12.21□□□□□ -0.45
TP53-206ENST00000455263 APOA4P06727 396 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 MPSTP25325 297 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 SPINT3P49223 89 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 TSNQ15631 228 aaKnown RBP12.21□□□□□ -0.45
TP53-206ENST00000455263 CFAP157Q5JU67 520 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 EGFLAMQ63HQ2 1017 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 PARS2Q7L3T8 475 aaKnown RBP12.21□□□□□ -0.45
TP53-206ENST00000455263 CPA6Q8N4T0 437 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 OR6Y1Q8NGX8 325 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 LKAAEAR1Q8TD35 194 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.21□□□□□ -0.452e-7■■■■■ 62.8
TP53-206ENST00000455263 ESAMQ96AP7 390 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 TMEM237Q96Q45 408 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 LYSMD1Q96S90 227 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 FAM8A1Q9UBU6 413 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 TRIM33Q9UPN9 1127 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 MTCH2Q9Y6C9 303 aa12.21□□□□□ -0.45
TP53-206ENST00000455263 KIF26AQ9ULI4 1882 aaPredicted RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms