RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 AHCYL2Q96HN2 611 aaKnown RBP12.77□□□□□ -0.37
CHD3-206ENST00000452447 DPYSL5Q9BPU6 564 aa12.77□□□□□ -0.37
CHD3-206ENST00000452447 CARD9Q9H257 536 aa12.77□□□□□ -0.37
CHD3-206ENST00000452447 UBP1Q9NZI7 540 aa12.77□□□□□ -0.37
CHD3-206ENST00000452447 KLHL8Q9P2G9 620 aaPredicted RBP12.77□□□□□ -0.37
CHD3-206ENST00000452447 ZNF711Q9Y462 761 aa12.77□□□□□ -0.37
CHD3-206ENST00000452447 IGHV1OR21-1A0A087WYE8 117 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 IGHV5-10-1A0A0J9YXX1 117 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 ERVH48-1M5A8F1 160 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 HGSO14964 777 aaPredicted RBP12.76□□□□□ -0.37
CHD3-206ENST00000452447 GRID2O43424 1007 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 NUAK1O60285 661 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 IPO7O95373 1038 aaKnown RBP12.76□□□□□ -0.37
CHD3-206ENST00000452447 ACP5P13686 325 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 SLC2A4P14672 509 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 PECAM1P16284 738 aaPredicted RBP12.76□□□□□ -0.37
CHD3-206ENST00000452447 DCDC1P59894 354 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 GPLD1P80108 840 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 HHEXQ03014 270 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 C16orf72Q14CZ0 275 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 PDPK2PQ6A1A2 396 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 ZNF574Q6ZN55 896 aaPredicted RBP12.76□□□□□ -0.37
CHD3-206ENST00000452447 TMC3Q7Z5M5 1100 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 DAAM2Q86T65 1068 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 ZC3H18Q86VM9 953 aaKnown RBP12.76□□□□□ -0.37
CHD3-206ENST00000452447 PHYKPLQ8IUZ5 450 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 TRAM1L1Q8N609 369 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 OR4D9Q8NGE8 314 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 OR10G6Q8NH81 332 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 USP7Q93009 1102 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 TADA1Q96BN2 335 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 RBM41Q96IZ5 413 aaKnown RBP12.76□□□□□ -0.37
CHD3-206ENST00000452447 CCNL2Q96S94 520 aaPredicted RBP12.76□□□□□ -0.37
CHD3-206ENST00000452447 TRIM39Q9HCM9 518 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 FAM153AQ9UHL3 310 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 ACSL6Q9UKU0 697 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 TFR2Q9UP52 801 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 KCNK6Q9Y257 313 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 SSUH2Q9Y2M2 353 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 PCDHB11Q9Y5F2 797 aa12.76□□□□□ -0.37
CHD3-206ENST00000452447 HELZ2Q9BYK8 2649 aaKnown RBP12.76□□□□□ -0.37
CHD3-206ENST00000452447 PRAMEF33A0A0G2JMD5 474 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 GPR89AB7ZAQ6 455 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 K7ENP7 123 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 SNX2O60749 519 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 PRAMEF10O60809 474 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 GPR89BP0CG08 455 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 LIPCP11150 499 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 CSTF2P33240 577 aaKnown RBP eCLIP12.75□□□□□ -0.37
CHD3-206ENST00000452447 ETV5P41161 510 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 LIMK2P53671 638 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 C19orf57Q0VDD7 668 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 TRA2AQ13595 282 aaKnown RBP eCLIP12.75□□□□□ -0.37
CHD3-206ENST00000452447 CCDC181Q5TID7 509 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 C11orf63Q6NUN7 778 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 INO80CQ6PI98 192 aaPredicted RBP12.75□□□□□ -0.37
CHD3-206ENST00000452447 PID1Q7Z2X4 250 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 SLC9B2Q86UD5 537 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 ZNF761Q86XN6 746 aaPredicted RBP12.75□□□□□ -0.37
CHD3-206ENST00000452447 SNRNP27Q8WVK2 155 aaKnown RBP12.75□□□□□ -0.37
CHD3-206ENST00000452447 GLYATL1Q969I3 302 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 SH3KBP1Q96B97 665 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 HAUS1Q96CS2 278 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 CCDC74BQ96LY2 380 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 VAT1Q99536 393 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 HERPUD2Q9BSE4 406 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 OR2AG1Q9H205 316 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 ARFGAP3Q9NP61 516 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 ATXN10Q9UBB4 475 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 TBC1D29Q9UFV1 150 aa12.75□□□□□ -0.37
CHD3-206ENST00000452447 PCYT1BQ9Y5K3 369 aaPredicted RBP12.75□□□□□ -0.37
CHD3-206ENST00000452447 hCG_1818297A0A087WSY0 165 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 OR5K4A6NMS3 321 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 DUX1O43812 170 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 EML2O95834 649 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 EPOP01588 193 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 PRB1P04280 392 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 ZNF8P17098 575 aaPredicted RBP12.74□□□□□ -0.37
CHD3-206ENST00000452447 BPIP17213 487 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 NFKB1P19838 968 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 NAP1L1P55209 391 aaKnown RBP12.74□□□□□ -0.37
CHD3-206ENST00000452447 ADCY2Q08462 1091 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 WASHC5Q12768 1159 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 SQSTM1Q13501 440 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 TGIF1Q15583 401 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 IYDQ6PHW0 289 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 AVL9Q8NBF6 648 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 AGBL5Q8NDL9 886 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 CCDC112Q8NEF3 446 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 HTR3CQ8WXA8 447 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 FERMT1Q9BQL6 677 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 OSGEPL1Q9H4B0 414 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 NFKBIL1Q9UBC1 381 aaPredicted RBP12.74□□□□□ -0.37
CHD3-206ENST00000452447 EPN1Q9Y6I3 576 aaPredicted RBP12.74□□□□□ -0.37
CHD3-206ENST00000452447 SDK2Q58EX2 2172 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 GCN1Q92616 2671 aaKnown RBP12.74□□□□□ -0.37
CHD3-206ENST00000452447 SPTA1P02549 2419 aa12.74□□□□□ -0.37
CHD3-206ENST00000452447 KIR2DS5A0A0G2JLQ3 304 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 A0A0G2JNG1 304 aa12.73□□□□□ -0.37
CHD3-206ENST00000452447 LOC285095A0A1B0GVY8 99 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms