RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 GLYATL1Q969I3 302 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 HDAC10Q969S8 669 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 SKA1Q96BD8 255 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 STAMBPL1Q96FJ0 436 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 COX14Q96I36 57 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 HIC2Q96JB3 615 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 CDC42EP4Q9H3Q1 356 aaKnown RBP12.93□□□□□ -0.34
VPS33A-202ENST00000451053 FAM96AQ9H5X1 160 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 UGT1A7Q9HAW7 530 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 UGT1A10Q9HAW8 530 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 UGT1A8Q9HAW9 530 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 APPL1Q9UKG1 709 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 PNMA8BQ9ULN7 279 aaPredicted RBP12.93□□□□□ -0.34
VPS33A-202ENST00000451053 CHMP2BQ9UQN3 213 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 TEX264Q9Y6I9 313 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 OAS3Q9Y6K5 1087 aaKnown RBP12.93□□□□□ -0.34
VPS33A-202ENST00000451053 TP53BP1Q12888 1972 aaPredicted RBP12.92□□□□□ -0.34
VPS33A-202ENST00000451053 FAM237BA0A1B0GVD1 139 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 LNP1A1A4G5 178 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 TMEM202A6NGA9 273 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 ARHGAP33O14559 1287 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 MAGEC1O60732 1142 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 LRP3O75074 770 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 TTC4O95801 387 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 GOT2P00505 430 aaKnown RBP12.92□□□□□ -0.34
VPS33A-202ENST00000451053 HOXC4P09017 264 aaPredicted RBP12.92□□□□□ -0.34
VPS33A-202ENST00000451053 ENGP17813 658 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 PGAM1P18669 254 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 ELK3P41970 407 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 POLD2P49005 469 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 CDKN1CP49918 316 aaPredicted RBP12.92□□□□□ -0.34
VPS33A-202ENST00000451053 EIF2B5Q13144 721 aaKnown RBP12.92□□□□□ -0.34
VPS33A-202ENST00000451053 NFATC2Q13469 925 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 ITGA9Q13797 1035 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 FASTKD3Q14CZ7 662 aaKnown RBP12.92□□□□□ -0.34
VPS33A-202ENST00000451053 SMAD1Q15797 465 aaKnown RBP12.92□□□□□ -0.34
VPS33A-202ENST00000451053 CSRP2Q16527 193 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 KHDC1Q4VXA5 237 aaKnown RBP12.92□□□□□ -0.34
VPS33A-202ENST00000451053 ZNF542PQ5EBM4 170 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 ZRANB3Q5FWF4 1079 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 ZNF648Q5T619 568 aaPredicted RBP12.92□□□□□ -0.34
VPS33A-202ENST00000451053 DOK6Q6PKX4 331 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 MACC1Q6ZN28 852 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 DCP2Q8IU60 420 aaKnown RBP12.92□□□□□ -0.34
VPS33A-202ENST00000451053 ANKMY2Q8IV38 441 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 FBXO36Q8NEA4 188 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 BTN2A2Q8WVV5 523 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 PEX13Q92968 403 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 ZNF669Q96BR6 464 aaPredicted RBP12.92□□□□□ -0.34
VPS33A-202ENST00000451053 WDR92Q96MX6 357 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 FCRL3Q96P31 734 aaPredicted RBP12.92□□□□□ -0.34
VPS33A-202ENST00000451053 VPS35Q96QK1 796 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 EBNA1BP2Q99848 306 aaKnown RBP12.92□□□□□ -0.34
VPS33A-202ENST00000451053 ACBD3Q9H3P7 528 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 ASB8Q9H765 288 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 NINJ2Q9NZG7 142 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 ZC3H7BQ9UGR2 993 aaKnown RBP12.92□□□□□ -0.34
VPS33A-202ENST00000451053 TMEM98Q9Y2Y6 226 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 SLC30A1Q9Y6M5 507 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 ADAMTS9Q9P2N4 1935 aa12.92□□□□□ -0.34
VPS33A-202ENST00000451053 ZCWPW2A0A1B0GU75 182 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 MTX2O75431 263 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 SLC25A14O95258 325 aaPredicted RBP12.91□□□□□ -0.34
VPS33A-202ENST00000451053 POLBP06746 335 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 ABHD2P08910 425 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 ITGALP20701 1170 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 ARNTP27540 789 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 HTR1BP28222 390 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 FOXN2P32314 431 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 HSD17B3P37058 310 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 PRAMEP78395 509 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 CACNG1Q06432 222 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 PTK2BQ14289 1009 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 CASP8Q14790 479 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 HLA-BQ31612 363 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 ANKRD20A4Q4UJ75 823 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 KIAA0930Q6ICG6 404 aaPredicted RBP12.91□□□□□ -0.34
VPS33A-202ENST00000451053 PSAPL1Q6NUJ1 521 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 AFTPHQ6ULP2 937 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 ENPP7Q6UWV6 458 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 SNX20Q7Z614 316 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 TMEM135Q86UB9 458 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 PARGQ86W56 976 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 PHYKPLQ8IUZ5 450 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 PIANPQ8IYJ0 282 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 PNPLA1Q8N8W4 532 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 OR56A4Q8NGH8 313 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 OR6P1Q8NGX9 317 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 OR1E3Q8WZA6 343 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 CCDC97Q96F63 343 aaPredicted RBP12.91□□□□□ -0.34
VPS33A-202ENST00000451053 PDXPQ96GD0 296 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 C9orf72Q96LT7 481 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 GTPBP2Q9BX10 602 aaKnown RBP12.91□□□□□ -0.34
VPS33A-202ENST00000451053 VIPAS39Q9H9C1 493 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 IL21RQ9HBE5 538 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 PLAC1Q9HBJ0 212 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 FGF22Q9HCT0 170 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 MRPL40Q9NQ50 206 aaKnown RBP12.91□□□□□ -0.34
VPS33A-202ENST00000451053 RXFP3Q9NSD7 469 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 SMOXQ9NWM0 555 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms