RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ANKRD22Q5VYY1 191 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CCBE1Q6UXH8 406 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 DENND5BQ6ZUT9 1274 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 KDELC2Q7Z4H8 507 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 WDR53Q7Z5U6 358 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 TFAP2DQ7Z6R9 452 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TSPAN33Q86UF1 283 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 GALNT13Q8IUC8 556 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CCDC117Q8IWD4 279 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 ZC3H7AQ8IWR0 971 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 CBR4Q8N4T8 237 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 FIBCD1Q8N539 461 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 OXR1Q8N573 874 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 C12orf45Q8N5I9 185 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 PRELID2Q8N945 189 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 REPS2Q8NFH8 660 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ABHD11Q8NFV4 315 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 OR6Q1Q8NGQ2 317 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ZFAND1Q8TCF1 268 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TMC2Q8TDI7 906 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 LRTOMTQ8WZ04 291 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 GTF2H4Q92759 462 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RBPMSQ93062 196 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC7A6OSQ96CW6 309 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 BORCS6Q96GS4 357 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 EXOC2Q96KP1 924 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ZNF641Q96N77 438 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 APBA2Q99767 749 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 FSD1LQ9BXM9 530 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 KMT5AQ9NQR1 393 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 FBXO6Q9NRD1 293 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 DUSP22Q9NRW4 184 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC22A11Q9NSA0 550 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.2□□□□□ -2.062e-9■■■■■ 36.4
USP53-202ENST00000450251 ZSWIM5Q9P217 1185 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ERVW-1Q9UQF0 538 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ACOT9Q9Y305 439 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 NAALAD2Q9Y3Q0 740 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 AP1M2Q9Y6Q5 423 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 EMSYQ7Z589 1322 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ADAMTS13Q76LX8 1427 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 KNDC1Q76NI1 1749 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 KIF13BQ9NQT8 1826 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 MRC1P22897 1456 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CNTNAP5Q8WYK1 1306 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 GLYATL1P3A0A0U1RQE8 302 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 AGAP5A6NIR3 686 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CLDN24A6NM45 220 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 H0Y858 1186 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 J3QRK9 145 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 APOC4-APOC2K7ER74 178 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PDCD5O14737 125 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 HSPA12AO43301 675 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 OIP5O43482 229 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 NRP2O60462 931 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PLOD3O60568 738 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 VPS26AO75436 327 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CABYRO75952 493 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SERPINA3P01011 423 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 APOC2P02655 101 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ODC1P11926 461 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TCF3P15923 654 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 EPCAMP16422 314 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CD36P16671 472 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PRKCAP17252 672 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TPSB2P20231 275 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 BMP6P22004 513 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 HOXC9P31274 260 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 RPL35P42766 123 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 CDKN2CP42773 168 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 RGS19P49795 217 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 GBX2P52951 348 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 CTSWP56202 376 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 DYNLL1P63167 89 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 UBXN2AP68543 259 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CD83Q01151 205 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SLC3A1Q07837 685 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CCNIQ14094 377 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 HNF4GQ14541 408 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TPSAB1Q15661 275 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 HIST2H2ACQ16777 129 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 PTPRNQ16849 979 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 USP41Q3LFD5 358 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PIGGQ5H8A4 983 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 DENND1BQ6P3S1 775 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ZCCHC12Q6PEW1 402 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 METAP1DQ6UB28 335 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 AGMOQ6ZNB7 445 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ILDR2Q71H61 639 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PEG10Q86TG7 708 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 METTL4Q8N3J2 472 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TRPV3Q8NET8 790 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 OR52K2Q8NGK3 314 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 LHFPL5Q8TAF8 219 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ADAM32Q8TC27 787 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TFB1MQ8WVM0 346 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 GPKOWQ92917 476 aaPredicted RBP eCLIP2.19□□□□□ -2.06
USP53-202ENST00000450251 KAT5Q92993 513 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ULK4Q96C45 1275 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 FBXL8Q96CD0 374 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms