RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 TRPM8Q7Z2W7 1104 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 SPNS2Q8IVW8 549 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 NKAPQ8N5F7 415 aaKnown RBP14.14□□□□□ -0.15
USP39-207ENST00000450066 RFWD2Q8NHY2 731 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 PIP4K2CQ8TBX8 421 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 PPP4R1Q8TF05 950 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 FAM136AQ96C01 138 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 CCDC126Q96EE4 140 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 DERL2Q9GZP9 239 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 CDH19Q9H159 772 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 RAD18Q9NS91 495 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 TRMT6Q9UJA5 497 aaKnown RBP14.14□□□□□ -0.15
USP39-207ENST00000450066 GNPTGQ9UJJ9 305 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 E5RI56 91 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 H3BMM5 538 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 KIAA0754O94854 1291 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 HNRNPLP14866 589 aaKnown RBP eCLIP14.14□□□□□ -0.15
USP39-207ENST00000450066 CHRM3P20309 590 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 DNAJB13P59910 316 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 RALGDSQ12967 914 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 E2F5Q15329 346 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 ATP13A5Q4VNC0 1218 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 EGFLAMQ63HQ2 1017 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 RFLNAQ6ZTI6 216 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 HSD11B1LQ7Z5J1 315 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 DSG4Q86SJ6 1040 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 SUGP1Q8IWZ8 645 aaKnown RBP14.14□□□□□ -0.15
USP39-207ENST00000450066 RHEBL1Q8TAI7 183 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 CCT6BQ92526 530 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 ULK4Q96C45 1275 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 PPP1R16AQ96I34 528 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 RMDN2Q96LZ7 410 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 SORT1Q99523 831 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 BOCQ9BWV1 1114 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 GATA5Q9BWX5 397 aaPredicted RBP14.14□□□□□ -0.15
USP39-207ENST00000450066 ALG9Q9H6U8 611 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 KCNK13Q9HB14 408 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 NFKBIL1Q9UBC1 381 aaPredicted RBP14.14□□□□□ -0.15
USP39-207ENST00000450066 GALPQ9UBC7 116 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 DCTN4Q9UJW0 460 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 ZBTB14O43829 449 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 LYPLA1O75608 230 aaPredicted RBP14.13□□□□□ -0.15
USP39-207ENST00000450066 EPHX1P07099 455 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 ARRB2P32121 409 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 TNFRSF4P43489 277 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 CLCN7P51798 805 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 ATP6V0D1P61421 351 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 ENPP2Q13822 863 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 PTRHD1Q6GMV3 140 aaKnown RBP14.13□□□□□ -0.15
USP39-207ENST00000450066 PIWIL2Q8TC59 973 aaKnown RBP14.13□□□□□ -0.15
USP39-207ENST00000450066 CD200R1Q8TD46 325 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 CSGALNACT1Q8TDX6 532 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 PTERQ96BW5 349 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 SGF29Q96ES7 293 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 SIKE1Q9BRV8 207 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 KDM4CQ9H3R0 1056 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 FAM83DQ9H4H8 585 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 TFB2MQ9H5Q4 396 aaKnown RBP14.13□□□□□ -0.15
USP39-207ENST00000450066 FBRSL1Q9HCM7 1045 aaKnown RBP14.13□□□□□ -0.15
USP39-207ENST00000450066 BRWD1Q9NSI6 2320 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 A0A0G2JND7 137 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 F8W8V4 182 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 H0Y858 1186 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 NPC1O15118 1278 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 NSG1P42857 185 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 SOX9P48436 509 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 GALK1P51570 392 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 NAGLUP54802 743 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 FBXL19Q6PCT2 694 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 MACC1Q6ZN28 852 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 CCDC121Q6ZUS5 278 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 RAVER1Q8IY67 606 aaKnown RBP14.13□□□□□ -0.15
USP39-207ENST00000450066 SIDT2Q8NBJ9 832 aaKnown RBP14.13□□□□□ -0.15
USP39-207ENST00000450066 TXNDC5Q8NBS9 432 aaKnown RBP14.13□□□□□ -0.15
USP39-207ENST00000450066 ARRDC3Q96B67 414 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 CCDC97Q96F63 343 aaPredicted RBP14.13□□□□□ -0.15
USP39-207ENST00000450066 ACOX2Q99424 681 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 COPS8Q99627 209 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 SLC30A3Q99726 388 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 P2RY13Q9BPV8 354 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 DRC3Q9H069 523 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 PRSS16Q9NQE7 514 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 SMOXQ9NWM0 555 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 CACNA2D2Q9NY47 1150 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 ZDHHC3Q9NYG2 299 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 KCNK4Q9NYG8 393 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 DHRS7Q9Y394 339 aa14.13□□□□□ -0.15
USP39-207ENST00000450066 TCF20Q9UGU0 1960 aaKnown RBP14.13□□□□□ -0.15
USP39-207ENST00000450066 IGLV3-16A0A075B6K0 115 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 CCDC189A1A4V9 331 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 PSMD11O00231 422 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 IPO13O94829 963 aaKnown RBP14.12□□□□□ -0.15
USP39-207ENST00000450066 TSPAN12O95859 305 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 ELFN1P0C7U0 828 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 ETV3P41162 512 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 KCNC1P48547 511 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 ARFIP2P53365 341 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 METAP1P53582 386 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 IL2P60568 153 aa14.12□□□□□ -0.15
USP39-207ENST00000450066 ELP6Q0PNE2 266 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms