RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 RPS14P62263 151 aaKnown RBP9.61□□□□□ -0.87
RFC4-210ENST00000449502 IRF9Q00978 393 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 ZBTB16Q05516 673 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 CNTN1Q12860 1018 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 GTF2H3Q13889 308 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 MLF2Q15773 248 aaPredicted RBP9.61□□□□□ -0.87
RFC4-210ENST00000449502 ATP13A5Q4VNC0 1218 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 LDLRAP1Q5SW96 308 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 LRRC8EQ6NSJ5 796 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 ZNF549Q6P9A3 640 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 KIAA1324Q6UXG2 1013 aaKnown RBP9.61□□□□□ -0.87
RFC4-210ENST00000449502 Q6ZVL8 140 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 MICALCLQ6ZW33 695 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 CEP97Q8IW35 865 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 NKAPQ8N5F7 415 aaKnown RBP9.61□□□□□ -0.87
RFC4-210ENST00000449502 PNPLA1Q8N8W4 532 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 IL17RCQ8NAC3 791 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 RPLP0P6Q8NHW5 317 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 DTX3LQ8TDB6 740 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 ZNF75CPQ92670 426 aaPredicted RBP9.61□□□□□ -0.87
RFC4-210ENST00000449502 KCNJ9Q92806 393 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 VOPP1Q96AW1 172 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 FAM136AQ96C01 138 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 NXNL1Q96CM4 212 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 NUS1Q96E22 293 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 SIPA1Q96FS4 1042 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 SHDQ96IW2 340 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 MRPL57Q9BQC6 102 aaKnown RBP9.61□□□□□ -0.87
RFC4-210ENST00000449502 RIOK2Q9BVS4 552 aaKnown RBP9.61□□□□□ -0.87
RFC4-210ENST00000449502 C1QTNF7Q9BXJ2 289 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 MRPL46Q9H2W6 279 aaKnown RBP9.61□□□□□ -0.87
RFC4-210ENST00000449502 C12orf65Q9H3J6 166 aaKnown RBP9.61□□□□□ -0.87
RFC4-210ENST00000449502 FBXL12Q9NXK8 326 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.61□□□□□ -0.87
RFC4-210ENST00000449502 TMEM216Q9P0N5 145 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.61□□□□□ -0.87
RFC4-210ENST00000449502 HCN2Q9UL51 889 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 SCML1Q9UN30 329 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 ITM2BQ9Y287 266 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 FADS3Q9Y5Q0 445 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 HELZP42694 1942 aaKnown RBP9.6□□□□□ -0.87
RFC4-210ENST00000449502 NUP210Q8TEM1 1887 aaPredicted RBP9.6□□□□□ -0.87
RFC4-210ENST00000449502 TRBV5-4A0A0C4DH59 114 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 A0A1W2PP55 124 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 PABPN1LA6NDY0 278 aaKnown RBP9.6□□□□□ -0.87
RFC4-210ENST00000449502 AREL1O15033 823 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 AP1G1O43747 822 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 MAGEC1O60732 1142 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 DNAJC6O75061 913 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 SMIM24O75264 130 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 TM7SF2O76062 418 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 RECQL5O94762 991 aaPredicted RBP9.6□□□□□ -0.87
RFC4-210ENST00000449502 FAM107AO95990 144 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 PROCP04070 461 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 DHRS4L1P0CG22 281 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 TROVE2P10155 538 aaKnown RBP eCLIP9.6□□□□□ -0.87
RFC4-210ENST00000449502 C6P13671 934 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 IL9P15248 144 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 BGNP21810 368 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 ETV4P43268 484 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 RGS4P49798 205 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 METAP1P53582 386 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 IL2P60568 153 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 ATP6V0D1P61421 351 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 PRKCQQ04759 706 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 STX3Q13277 289 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 SGCGQ13326 291 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 ACAP2Q15057 778 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 CHI3L2Q15782 390 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 GKAP1Q5VSY0 366 aaPredicted RBP9.6□□□□□ -0.87
RFC4-210ENST00000449502 RAET1GQ6H3X3 334 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 MACC1Q6ZN28 852 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 RFLNAQ6ZTI6 216 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 ZNF765Q7L2R6 523 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 ZNF771Q7L3S4 317 aaPredicted RBP9.6□□□□□ -0.87
RFC4-210ENST00000449502 CYP2U1Q7Z449 544 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 RAB44Q7Z6P3 723 aaPredicted RBP9.6□□□□□ -0.87
RFC4-210ENST00000449502 PIM3Q86V86 326 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 TMPRSS6Q8IU80 811 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 PHYKPLQ8IUZ5 450 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 LRRC34Q8IZ02 419 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 PLD6Q8N2A8 252 aaKnown RBP9.6□□□□□ -0.87
RFC4-210ENST00000449502 OR14C36Q8NHC7 312 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 RAB3IL1Q8TBN0 382 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 PPP4R1Q8TF05 950 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 INPP5DQ92835 1189 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 SCAMP4Q969E2 229 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 GRAMD1AQ96CP6 724 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 CCDC126Q96EE4 140 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 DTD2Q96FN9 168 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 CCT8L2Q96SF2 557 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 GPR21Q99679 349 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 ZCCHC2Q9C0B9 1178 aaKnown RBP9.6□□□□□ -0.87
RFC4-210ENST00000449502 ABCG8Q9H221 673 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 POLMQ9NP87 494 aaPredicted RBP9.6□□□□□ -0.87
RFC4-210ENST00000449502 SMOXQ9NWM0 555 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 CPSF2Q9P2I0 782 aaKnown RBP9.6□□□□□ -0.87
RFC4-210ENST00000449502 NFKBIL1Q9UBC1 381 aaPredicted RBP9.6□□□□□ -0.87
RFC4-210ENST00000449502 XPR1Q9UBH6 696 aa9.6□□□□□ -0.87
RFC4-210ENST00000449502 CA14Q9ULX7 337 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms