RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 INHBAP08476 426 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 F7P08709 466 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-203ENST00000449049 PMLP29590 882 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 NUDT1P36639 197 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 PPARGP37231 505 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-203ENST00000449049 GPR1P46091 355 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 CSTF1Q05048 431 aaKnown RBP13.94□□□□□ -0.18
SHMT2-203ENST00000449049 ITIH4Q14624 930 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 ZNF789Q5FWF6 425 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 GRTP1Q5TC63 336 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 ADAMTSL4Q6UY14 1074 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 DDHD1Q8NEL9 900 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 GLYATL1Q969I3 302 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 BIRC7Q96CA5 298 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 MRRFQ96E11 262 aaKnown RBP13.94□□□□□ -0.18
SHMT2-203ENST00000449049 TTC1Q99614 292 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 RBBP8Q99708 897 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 EBF2Q9HAK2 575 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 C11orf16Q9NQ32 467 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 ZDHHC3Q9NYG2 299 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 PSMC3IPQ9P2W1 217 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-203ENST00000449049 CNOT6Q9ULM6 557 aaKnown RBP13.94□□□□□ -0.18
SHMT2-203ENST00000449049 INVSQ9Y283 1065 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 VPS9D1Q9Y2B5 631 aa13.94□□□□□ -0.18
SHMT2-203ENST00000449049 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-203ENST00000449049 TRPM6Q9BX84 2022 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 AGPSO00116 658 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 PFDN6O15212 129 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 SLC31A1O15431 190 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 CDH16O75309 829 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 HAUS5O94927 633 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 FSBPO95073 299 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 HNRNPA2B1P22626 353 aaKnown RBP13.93□□□□□ -0.18
SHMT2-203ENST00000449049 IGFALSP35858 605 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 CD151P48509 253 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 CEP85LQ5SZL2 805 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 GPRC6AQ5T6X5 926 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 CROCCP2Q86T23 111 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 ZC3HC1Q86WB0 502 aaKnown RBP13.93□□□□□ -0.18
SHMT2-203ENST00000449049 RIBC1Q8N443 379 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-203ENST00000449049 LPGAT1Q92604 370 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 COL25A1Q9BXS0 654 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-203ENST00000449049 RHOJQ9H4E5 214 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 FZD3Q9NPG1 666 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 DMTF1Q9Y222 760 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 IKBKGQ9Y6K9 419 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 METTL12A8MUP2 240 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 NDUFS3O75489 264 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 BCKDHBP21953 392 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 TRIM23P36406 574 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 PTGER3P43115 390 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 SLCO1A2P46721 670 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 SERPINB9P50453 376 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 LIMK2P53671 638 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 ADARP55265 1226 aaKnown RBP13.93□□□□□ -0.18
SHMT2-203ENST00000449049 ILF2Q12905 390 aaKnown RBP13.93□□□□□ -0.18
SHMT2-203ENST00000449049 CNSTQ6PJW8 725 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 PHYKPLQ8IUZ5 450 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 NELL1Q92832 810 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 COX14Q96I36 57 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 RUFY1Q96T51 708 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 ORAI3Q9BRQ5 295 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 FAM126AQ9BYI3 521 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-203ENST00000449049 CTNNAL1Q9UBT7 734 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 LGALS13Q9UHV8 139 aa13.93□□□□□ -0.18
SHMT2-203ENST00000449049 NUMA1Q14980 2115 aa13.92□□□□□ -0.18
SHMT2-203ENST00000449049 CNTFP26441 200 aa13.92□□□□□ -0.18
SHMT2-203ENST00000449049 SPRP35270 261 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-203ENST00000449049 RPL6Q02878 288 aaKnown RBP13.92□□□□□ -0.18
SHMT2-203ENST00000449049 INPP5AQ14642 412 aa13.92□□□□□ -0.18
SHMT2-203ENST00000449049 KRT71Q3SY84 523 aa13.92□□□□□ -0.18
SHMT2-203ENST00000449049 LDLRAP1Q5SW96 308 aa13.92□□□□□ -0.18
SHMT2-203ENST00000449049 HEATR4Q86WZ0 1026 aa13.92□□□□□ -0.18
SHMT2-203ENST00000449049 RBFAQ8N0V3 343 aa13.92□□□□□ -0.18
SHMT2-203ENST00000449049 CNPY4Q8N129 248 aa13.92□□□□□ -0.18
SHMT2-203ENST00000449049 TMEM145Q8NBT3 493 aa13.92□□□□□ -0.18
SHMT2-203ENST00000449049 HIC2Q96JB3 615 aa13.92□□□□□ -0.18
SHMT2-203ENST00000449049 VPS39Q96JC1 886 aa13.92□□□□□ -0.18
SHMT2-203ENST00000449049 COPS8Q99627 209 aa13.92□□□□□ -0.18
SHMT2-203ENST00000449049 TEX101Q9BY14 249 aa13.92□□□□□ -0.18
SHMT2-203ENST00000449049 P2RY12Q9H244 342 aa13.92□□□□□ -0.18
SHMT2-203ENST00000449049 CORO1CQ9ULV4 474 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-203ENST00000449049 A0A1W2PPC4 97 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 HMX2A2RU54 273 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 FAM86C2PA6NEL3 165 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 SMIM23A6NLE4 172 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 INPP4BO15327 924 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 OR1I1O60431 355 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 RPS3P23396 243 aaKnown RBP eCLIP13.91□□□□□ -0.184e-7■■■□□ 16.5
SHMT2-203ENST00000449049 AKT2P31751 481 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 CDK3Q00526 305 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 B4GALNT1Q00973 533 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 ZNF528Q3MIS6 628 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 HEXDCQ8WVB3 486 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 CCDC97Q96F63 343 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-203ENST00000449049 BOCQ9BWV1 1114 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 TLDC2A0PJX2 215 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 PRAMEF26H0Y7S4 382 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 FPGTO14772 594 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 GPR37L1O60883 481 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms