RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 TRIM33Q9UPN9 1127 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 SLC27A6Q9Y2P4 619 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 YBX2Q9Y2T7 364 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 OAS3Q9Y6K5 1087 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 SCN8AQ9UQD0 1980 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 GLYATL1P3A0A0U1RQE8 302 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 TRPC5OSA6NMA1 111 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 A8MT66 165 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 HRO43593 1189 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 BNIP3LO60238 219 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 PRAMEF1O95521 474 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 CYP17A1P05093 508 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 ESRRAP11474 423 aaPredicted RBP10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 CYP2A6P11509 494 aaPredicted RBP10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 ZNF30P17039 623 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 IMPDH1P20839 514 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 TARSP26639 723 aaKnown RBP10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 PTPN4P29074 926 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 IDH3AP50213 366 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 ST8SIA6P61647 398 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 CDKN3Q16667 212 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 CTC1Q2NKJ3 1217 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 TMEM207Q6UWW9 146 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 DPY19L3Q6ZPD9 716 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 ACAD11Q709F0 780 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 PIM3Q86V86 326 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 PIANPQ8IYJ0 282 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 TXNDC5Q8NBS9 432 aaKnown RBP10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 GRIN3AQ8TCU5 1115 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 SMARCD2Q92925 531 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 KIAA1191Q96A73 305 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 L3HYPDHQ96EM0 354 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 SGF29Q96ES7 293 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 BIRC8Q96P09 236 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 SMIM14Q96QK8 99 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 MCCC1Q96RQ3 725 aaPredicted RBP10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 NMUR2Q9GZQ4 415 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 CLPBQ9H078 707 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 ALG9Q9H6U8 611 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 ASB8Q9H765 288 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 SLC40A1Q9NP59 571 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 RAD18Q9NS91 495 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 GNPTGQ9UJJ9 305 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 FNDC3AQ9Y2H6 1198 aaKnown RBP10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 ATG2AQ2TAZ0 1938 aa10.5□□□□□ -0.73
VIPAS39-203ENST00000448935 TRBV5-4A0A0C4DH59 114 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 MATN2O00339 956 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 ZBTB14O43829 449 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 KERAO60938 352 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 RASSF9O75901 435 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 CLDN7O95471 211 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 UGT2B4P06133 528 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 CHRM3P20309 590 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 MAPK1P28482 360 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 ARRB2P32121 409 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 GKP32189 559 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 MNAT1P51948 309 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 IL2P60568 153 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 NFATC2Q13469 925 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 KCNC3Q14003 757 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 PDGFRLQ15198 375 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 EPGNQ6UW88 154 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 FAM151BQ6UXP7 276 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 Q6ZVU0 165 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 ALYREFQ86V81 257 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 NPAS3Q8IXF0 933 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 C12orf76Q8N812 135 aaPredicted RBP10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 NAT16Q8N8M0 369 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 KDM1BQ8NB78 822 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 VN1R2Q8NFZ6 395 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 ULK4Q96C45 1275 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 ASB16Q96NS5 453 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 PLEKHG4BQ96PX9 1271 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 GPR21Q99679 349 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 P2RY12Q9H244 342 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 COG4Q9H9E3 785 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 SLC28A3Q9HAS3 691 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 SLCO3A1Q9UIG8 710 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 CRLS1Q9UJA2 301 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 FAM50BQ9Y247 325 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 TNRC18O15417 2968 aaPredicted RBP10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 C2orf16Q68DN1 1984 aa10.49□□□□□ -0.73
VIPAS39-203ENST00000448935 GOLGA8QA0A0J9YX86 632 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 GOLGA8OA6NCC3 632 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 NPIPB15A6NHN6 443 aaPredicted RBP10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 GOLGA8NF8WBI6 632 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 ZNF195O14628 629 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 DIAPH2O60879 1101 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 CBX6O95503 412 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 CHRNGP07510 517 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 PRSS56P0CW18 603 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 T-ENOLP0DO92 83 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 BPIP17213 487 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 AOC1P19801 751 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 VAMP1P23763 118 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 CDKN1CP49918 316 aaPredicted RBP10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 ALDH18A1P54886 795 aaKnown RBP10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 HERVK_113P63132 956 aa10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 LSM11P83369 360 aaKnown RBP eCLIP10.48□□□□□ -0.73
VIPAS39-203ENST00000448935 TIAL1Q01085 375 aaKnown RBP eCLIP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms