RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 RAB14P61106 215 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 LSM3P62310 102 aaKnown RBP10.69□□□□□ -0.7
LINC00342-202ENST00000448494 ERVK-8P63133 956 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 CYP4F8P98187 520 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 CACNB1Q02641 598 aaPredicted RBP10.69□□□□□ -0.7
LINC00342-202ENST00000448494 GRK1Q15835 563 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 SGCAQ16586 387 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 RUNDC3AQ59EK9 446 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 METTL24Q5JXM2 366 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 CLLU1Q5K131 121 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 PDSS1Q5T2R2 415 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 SYT6Q5T7P8 510 aaPredicted RBP10.69□□□□□ -0.7
LINC00342-202ENST00000448494 MACC1Q6ZN28 852 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 LDHDQ86WU2 507 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 TIGD4Q8IY51 512 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 YIPF7Q8N8F6 280 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 KCNH5Q8NCM2 988 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 OR5T2Q8NGG2 359 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 AP2M1Q96CW1 435 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 MYRFLQ96LU7 910 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 OR2A14Q96R47 310 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 APBA2Q99767 749 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 STRA6Q9BX79 667 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 RACGAP1Q9H0H5 632 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 RANBP3Q9H6Z4 567 aaPredicted RBP10.69□□□□□ -0.7
LINC00342-202ENST00000448494 KAT8Q9H7Z6 458 aaKnown RBP10.69□□□□□ -0.7
LINC00342-202ENST00000448494 KMT5AQ9NQR1 393 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 AURKCQ9UQB9 309 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 LIPT1Q9Y234 373 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 TOGARAM1Q9Y4F4 1720 aa10.69□□□□□ -0.7
LINC00342-202ENST00000448494 FAM149AA5PLN7 773 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 CXorf49A8MYA2 514 aaPredicted RBP10.68□□□□□ -0.7
LINC00342-202ENST00000448494 CLIC2O15247 247 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 H2AFYO75367 372 aaKnown RBP10.68□□□□□ -0.7
LINC00342-202ENST00000448494 LRCH4O75427 683 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 CNTN5O94779 1100 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 POP4O95707 220 aaKnown RBP10.68□□□□□ -0.7
LINC00342-202ENST00000448494 NPPAP01160 153 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 GPIP06744 558 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 TCF4P15884 667 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 SOX11P35716 441 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 AKR1D1P51857 326 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 MAP2K6P52564 334 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 HSD17B7P56937 341 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 ABRQ12979 859 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 RTP2Q5QGT7 225 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 OR7E24Q6IFN5 339 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 TEX261Q6UWH6 196 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 NAPRTQ6XQN6 538 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 HACD2Q6Y1H2 254 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 GALNT10Q86SR1 603 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 RBFAQ8N0V3 343 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 OR8H3Q8N146 312 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 MPP5Q8N3R9 675 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 AMER2Q8N7J2 671 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 TRPV3Q8NET8 790 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 TMC2Q8TDI7 906 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 RBPMSQ93062 196 aaKnown RBP10.68□□□□□ -0.7
LINC00342-202ENST00000448494 HDAC10Q969S8 669 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 ZSWIM3Q96MP5 696 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 GPR137Q96N19 417 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 SLITRK1Q96PX8 696 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 ORAI2Q96SN7 254 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 TINAGL1Q9GZM7 467 aaPredicted RBP10.68□□□□□ -0.7
LINC00342-202ENST00000448494 DCSTAMPQ9H295 470 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 FAM83DQ9H4H8 585 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 SOX17Q9H6I2 414 aaPredicted RBP10.68□□□□□ -0.7
LINC00342-202ENST00000448494 TLR9Q9NR96 1032 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.68□□□□□ -0.7
LINC00342-202ENST00000448494 CD274Q9NZQ7 290 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 TMX2Q9Y320 296 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 U3KQ87 197 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 SOAT2O75908 522 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 CELF2O95319 508 aaKnown RBP10.68□□□□□ -0.7
LINC00342-202ENST00000448494 AMHP03971 560 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 FABP1P07148 127 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 ATP6V1B2P21281 511 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 RPL22P35268 128 aaKnown RBP10.68□□□□□ -0.7
LINC00342-202ENST00000448494 CCR10P46092 362 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 NUBP1P53384 320 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 SLC12A3P55017 1021 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 SNRPD2P62316 118 aaKnown RBP10.68□□□□□ -0.7
LINC00342-202ENST00000448494 ZNF91Q05481 1191 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 LGALS3BPQ08380 585 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 GRM4Q14833 912 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 TTC23Q5W5X9 447 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 FAM180BQ6P0A1 224 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 LRFN4Q6PJG9 635 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 PIGZQ86VD9 579 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 ERO1BQ86YB8 467 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 PCDH20Q8N6Y1 951 aaKnown RBP10.68□□□□□ -0.7
LINC00342-202ENST00000448494 CLRN3Q8NCR9 226 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 CHDHQ8NE62 594 aaPredicted RBP10.68□□□□□ -0.7
LINC00342-202ENST00000448494 OR6P1Q8NGX9 317 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 SPATA18Q8TC71 538 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 ASB12Q8WXK4 309 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 RIT1Q92963 219 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 TBC1D20Q96BZ9 403 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 GJD4Q96KN9 370 aaPredicted RBP10.68□□□□□ -0.7
LINC00342-202ENST00000448494 RDH12Q96NR8 316 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms