RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 LIASO43766 372 aa24.83■■□□□ 1.57
HTATSF1-203ENST00000448450 OPA1O60313 960 aa24.83■■□□□ 1.57
HTATSF1-203ENST00000448450 USP12O75317 370 aa24.83■■□□□ 1.57
HTATSF1-203ENST00000448450 CXCR5P32302 372 aa24.83■■□□□ 1.57
HTATSF1-203ENST00000448450 ADRA1AP35348 466 aa24.83■■□□□ 1.57
HTATSF1-203ENST00000448450 UCNP55089 124 aa24.83■■□□□ 1.57
HTATSF1-203ENST00000448450 PARP6Q2NL67 630 aa24.83■■□□□ 1.57
HTATSF1-203ENST00000448450 RANBP10Q6VN20 620 aa24.83■■□□□ 1.57
HTATSF1-203ENST00000448450 EFL1Q7Z2Z2 1120 aaKnown RBP24.83■■□□□ 1.57
HTATSF1-203ENST00000448450 REXO1L1PQ8IX06 675 aa24.83■■□□□ 1.57
HTATSF1-203ENST00000448450 SDR16C5Q8N3Y7 309 aa24.83■■□□□ 1.57
HTATSF1-203ENST00000448450 IFI44Q8TCB0 444 aa24.83■■□□□ 1.57
HTATSF1-203ENST00000448450 TRABDQ9H4I3 376 aa24.83■■□□□ 1.57
HTATSF1-203ENST00000448450 NCKIPSDQ9NZQ3 722 aa24.83■■□□□ 1.57
HTATSF1-203ENST00000448450 ZNF148Q9UQR1 794 aa24.83■■□□□ 1.57
HTATSF1-203ENST00000448450 PLEKHM1Q9Y4G2 1056 aa24.83■■□□□ 1.57
HTATSF1-203ENST00000448450 ERVH48-1M5A8F1 160 aa24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 CEP104O60308 925 aa24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 METTL18O95568 372 aa24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 MPOP05164 745 aa24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 GP1BAP07359 652 aa24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 IVLP07476 585 aa24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 ADCY8P40145 1251 aa24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 RPIAP49247 311 aa24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 TMPRSS3P57727 454 aa24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 GABREP78334 506 aa24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 CFHR1Q03591 330 aa24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 ZNF648Q5T619 568 aaPredicted RBP24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 CDCP2Q5VXM1 449 aa24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 GLT6D1Q7Z4J2 308 aa24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 KYQ8NBH2 561 aa24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 NAF1Q96HR8 494 aaKnown RBP24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 TRMT1Q9NXH9 659 aaKnown RBP24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 HACD3Q9P035 362 aa24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 PADI4Q9UM07 663 aa24.82■■□□□ 1.56
HTATSF1-203ENST00000448450 AK4P27144 223 aaPredicted RBP24.81■■□□□ 1.56
HTATSF1-203ENST00000448450 HMGCLP35914 325 aa24.81■■□□□ 1.56
HTATSF1-203ENST00000448450 OASLQ15646 514 aaKnown RBP24.81■■□□□ 1.56
HTATSF1-203ENST00000448450 SFTPA2Q8IWL1 248 aa24.81■■□□□ 1.56
HTATSF1-203ENST00000448450 TBL1YQ9BQ87 522 aa24.81■■□□□ 1.56
HTATSF1-203ENST00000448450 ZSCAN5AQ9BUG6 496 aa24.81■■□□□ 1.56
HTATSF1-203ENST00000448450 FRMD8P1Q9BZ68 369 aaPredicted RBP24.81■■□□□ 1.56
HTATSF1-203ENST00000448450 CDH19Q9H159 772 aa24.81■■□□□ 1.56
HTATSF1-203ENST00000448450 ABCG4Q9H172 646 aa24.81■■□□□ 1.56
HTATSF1-203ENST00000448450 DPEP2Q9H4A9 486 aa24.81■■□□□ 1.56
HTATSF1-203ENST00000448450 TRNAU1APQ9NX07 287 aaKnown RBP24.81■■□□□ 1.56
HTATSF1-203ENST00000448450 ZNHIT2Q9UHR6 403 aa24.81■■□□□ 1.56
HTATSF1-203ENST00000448450 PRKAB1Q9Y478 270 aa24.81■■□□□ 1.56
HTATSF1-203ENST00000448450 ARHGEF17Q96PE2 2063 aaPredicted RBP24.81■■□□□ 1.56
HTATSF1-203ENST00000448450 DXOO77932 396 aaKnown RBP24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 SLC25A14O95258 325 aaPredicted RBP24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 IFNB1P01574 187 aa24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 FGGP02679 453 aa24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 DCDC1P59894 354 aa24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 CTBSQ01459 385 aa24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 ILF3Q12906 894 aaKnown RBP eCLIP24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 PTPRCAPQ14761 206 aa24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 TAF1BQ53T94 588 aaPredicted RBP24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 ZNF569Q5MCW4 686 aa24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 PERM1Q5SV97 790 aa24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 NRROSQ86YC3 692 aa24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 TRAM1L1Q8N609 369 aa24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 ARL10Q8N8L6 244 aa24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 GPBAR1Q8TDU6 330 aa24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 SCARF2Q96GP6 870 aaPredicted RBP24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 PPP1R2P1Q96PQ5 205 aa24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 GSDMCQ9BYG8 508 aa24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 SPATS2LQ9NUQ6 558 aaKnown RBP24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 IL17CQ9P0M4 197 aa24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 RP1P56715 2156 aa24.8■■□□□ 1.56
HTATSF1-203ENST00000448450 COL6A6A6NMZ7 2263 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 EME2A4GXA9 379 aaPredicted RBP24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 B4DGG1 531 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 ZSCAN12O43309 604 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 CSO75390 466 aaKnown RBP24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 ETS1P14921 441 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 STIP1P31948 543 aaKnown RBP24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 ERVPABLB-1P60509 514 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 RHDQ02161 417 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 SIX1Q15475 284 aaPredicted RBP24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 PYCR3Q53H96 274 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 SLC30A9Q6PML9 568 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 PCSK4Q6UW60 755 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 PRUNE1Q86TP1 453 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 GALNT13Q8IUC8 556 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 MAPK15Q8TD08 544 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 PDLIM2Q96JY6 352 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 OR2M4Q96R27 311 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 POLR1BQ9H9Y6 1135 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 NFKBIL1Q9UBC1 381 aaPredicted RBP24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 PKP3Q9Y446 797 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 PCYT1BQ9Y5K3 369 aaPredicted RBP24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 ST14Q9Y5Y6 855 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 ARL5AQ9Y689 179 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 SCN8AQ9UQD0 1980 aa24.79■■□□□ 1.56
HTATSF1-203ENST00000448450 LSSP48449 732 aa24.78■■□□□ 1.56
HTATSF1-203ENST00000448450 LONRF2Q1L5Z9 754 aa24.78■■□□□ 1.56
HTATSF1-203ENST00000448450 DENND5AQ6IQ26 1287 aa24.78■■□□□ 1.56
HTATSF1-203ENST00000448450 KCNE4Q8WWG9 221 aa24.78■■□□□ 1.56
HTATSF1-203ENST00000448450 GLYATL1Q969I3 302 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms