RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 PER3P56645 1201 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 TAS2R39P59534 338 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 ABRAXAS2Q15018 415 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 RAP1GAP2Q684P5 730 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 CPNE9Q8IYJ1 553 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 TCP10LQ8TDR4 215 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 ACMSDQ8TDX5 336 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF431Q8TF32 576 aaPredicted RBP8.9□□□□□ -0.98
NIPBL-202ENST00000448238 AP2M1Q96CW1 435 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 KLQ9UEF7 1012 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 USP17L5A8MUK1 530 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 SLC9A3R1O14745 358 aaPredicted RBP8.9□□□□□ -0.99
NIPBL-202ENST00000448238 ITGA2BP08514 1039 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 RAB5CP51148 216 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 CAPZA1P52907 286 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 SLC12A3P55017 1021 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 CASP9P55211 416 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 PRR5P85299 388 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 FBXO43Q4G163 708 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 SWT1Q5T5J6 900 aaKnown RBP8.9□□□□□ -0.99
NIPBL-202ENST00000448238 USP30Q70CQ3 517 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 CREB3L2Q70SY1 520 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 FUKQ8N0W3 1084 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 ZSWIM2Q8NEG5 633 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 PIGXQ8TBF5 258 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 DCAKDQ8WVC6 231 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 LENG9Q96B70 501 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 NODALQ96S42 347 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 TAPBPLQ9BX59 468 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 BRINP2Q9C0B6 783 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 ELAC1Q9H777 363 aaKnown RBP8.9□□□□□ -0.99
NIPBL-202ENST00000448238 AGAP5A6NIR3 686 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 USP17L10C9JJH3 530 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 ATP6V1G2-DDX39BF2Z307 99 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 RAB36O95755 333 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 GZMAP12544 262 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 ECT2LQ008S8 904 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 TRIM28Q13263 835 aaKnown RBP8.9□□□□□ -0.99
NIPBL-202ENST00000448238 SLC30A6Q6NXT4 461 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 FAM136AQ96C01 138 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 TWNKQ96RR1 684 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 UCK2Q9BZX2 261 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 KAT8Q9H7Z6 458 aaKnown RBP8.9□□□□□ -0.99
NIPBL-202ENST00000448238 GFOD1Q9NXC2 390 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 PCTPQ9UKL6 214 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 PRR12Q9ULL5 1215 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 CHL1O00533 1208 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 NKAPLQ5M9Q1 402 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 MLIPQ5VWP3 458 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 KIF18BQ86Y91 864 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 GALNT15Q8N3T1 639 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 OR52E6Q96RD3 313 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 TUBA1CQ9BQE3 449 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 SAMD10Q9BYL1 202 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 POMKQ9H5K3 350 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 C14orf93Q9H972 538 aaKnown RBP8.9□□□□□ -0.99
NIPBL-202ENST00000448238 ERVK-19Q9WJR5 959 aa8.9□□□□□ -0.99
NIPBL-202ENST00000448238 ACOT2P49753 483 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 DYRK1AQ13627 763 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 TMC7Q7Z402 723 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 LAS2Q8IYD9 372 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 POU5F2Q8N7G0 328 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 SULT4A1Q9BR01 284 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 RNF146Q9NTX7 359 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 PTTG2Q9NZH5 202 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 CALML5Q9NZT1 146 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 FADS3Q9Y5Q0 445 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 NUP160Q12769 1436 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 EIF1AYO14602 144 aaKnown RBP8.89□□□□□ -0.99
NIPBL-202ENST00000448238 ENTPD6O75354 484 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 TULP3O75386 442 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 NPTXRO95502 500 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 HTR2BP41595 481 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 GRK6P43250 576 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 EIF1AXP47813 144 aaKnown RBP8.89□□□□□ -0.99
NIPBL-202ENST00000448238 SYT16Q17RD7 645 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 WDR53Q7Z5U6 358 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-202ENST00000448238 FAM83AQ86UY5 434 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 RNF148Q8N7C7 305 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 ZKSCAN4Q969J2 545 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-202ENST00000448238 KCTD7Q96MP8 289 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 MRPL57Q9BQC6 102 aaKnown RBP8.89□□□□□ -0.99
NIPBL-202ENST00000448238 IFT27Q9BW83 186 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 RBM22Q9NW64 420 aaKnown RBP eCLIP8.89□□□□□ -0.993e-6■■■■□ 26.3
NIPBL-202ENST00000448238 TEX13DA0A0J9YY54 714 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-202ENST00000448238 OR5H15A6NDH6 313 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 OR5H14A6NHG9 310 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 OR5H1A6NKK0 313 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 FAM196BA6NMK8 535 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF891A8MT65 544 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-202ENST00000448238 SCAMP1O15126 338 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 UBXN7O94888 489 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 PRAMEF12O95522 483 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 SERPINA6P08185 405 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 TPH1P17752 444 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 MTHFRP42898 656 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 CPT1AP50416 773 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 ITGA7Q13683 1181 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 PFKFB4Q16877 469 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 DCDC5Q6ZRR9 648 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms