RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 ZNF767PQ75MW2 155 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 PLPPR4Q7Z2D5 763 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 NOXA1Q86UR1 476 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 XYLT1Q86Y38 959 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 FBXL6Q8N531 539 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 SETD6Q8TBK2 473 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 BPIFB1Q8TDL5 484 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 MCRS1Q96EZ8 462 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 ZFYVE19Q96K21 471 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 PEBP4Q96S96 227 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 ZNF670Q9BS34 389 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 C1QTNF1Q9BXJ1 281 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 MRPL4Q9BYD3 311 aaKnown RBP19.08■□□□□ 0.65
HMGA1-205ENST00000447654 CHRAC1Q9NRG0 131 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 TOR4AQ9NXH8 423 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 TNFRSF10DQ9UBN6 386 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 DNMT3LQ9UJW3 386 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 TLK1Q9UKI8 766 aa19.08■□□□□ 0.65
HMGA1-205ENST00000447654 CCDC154A6NI56 674 aa19.08■□□□□ 0.64
HMGA1-205ENST00000447654 CAPN5O15484 640 aaPredicted RBP19.08■□□□□ 0.64
HMGA1-205ENST00000447654 HMGCRP04035 888 aa19.08■□□□□ 0.64
HMGA1-205ENST00000447654 CAPN1P07384 714 aa19.08■□□□□ 0.64
HMGA1-205ENST00000447654 IL7RP16871 459 aa19.08■□□□□ 0.64
HMGA1-205ENST00000447654 HTR2BP41595 481 aa19.08■□□□□ 0.64
HMGA1-205ENST00000447654 ST13P50502 369 aaKnown RBP19.08■□□□□ 0.64
HMGA1-205ENST00000447654 CACTIN-AS1Q8N1I8 211 aa19.08■□□□□ 0.64
HMGA1-205ENST00000447654 BRSK1Q8TDC3 778 aa19.08■□□□□ 0.64
HMGA1-205ENST00000447654 FAM167AQ96KS9 214 aa19.08■□□□□ 0.64
HMGA1-205ENST00000447654 QKIQ96PU8 341 aaKnown RBP eCLIP19.08■□□□□ 0.64
HMGA1-205ENST00000447654 PSKH2Q96QS6 385 aa19.08■□□□□ 0.64
HMGA1-205ENST00000447654 TBCBQ99426 244 aa19.08■□□□□ 0.64
HMGA1-205ENST00000447654 NXF2Q9GZY0 626 aaKnown RBP19.08■□□□□ 0.64
HMGA1-205ENST00000447654 PTPRHQ9HD43 1115 aa19.08■□□□□ 0.64
HMGA1-205ENST00000447654 PCDHB3Q9Y5E6 796 aa19.08■□□□□ 0.64
HMGA1-205ENST00000447654 PNMA8CA0A1B0GUJ8 204 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 METTL15A6NJ78 407 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 SLC1A7O00341 560 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 PRPSAP2O60256 369 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 ERVK-10P10266 1014 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 CYP2A7P20853 494 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 IL4RP24394 825 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 MGAT1P26572 445 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 CCR10P46092 362 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 EFNA5P52803 228 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 TPD52P55327 224 aaPredicted RBP19.07■□□□□ 0.64
HMGA1-205ENST00000447654 VBP1P61758 197 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 EMX1Q04741 257 aaPredicted RBP19.07■□□□□ 0.64
HMGA1-205ENST00000447654 PRPSAP1Q14558 356 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 STARD3Q14849 445 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 ANO4Q32M45 955 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 PLEKHG6Q3KR16 790 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 LDLRAD1Q5T700 205 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 FAM205BPQ63HN1 556 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 LAYNQ6UX15 382 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 GALNT6Q8NCL4 622 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 PJA1Q8NG27 643 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 LGALS12Q96DT0 336 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 PPP1R16BQ96T49 567 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 TRIM54Q9BYV2 358 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 FAM118AQ9NWS6 357 aa19.07■□□□□ 0.64
HMGA1-205ENST00000447654 CPSF3Q9UKF6 684 aaKnown RBP19.07■□□□□ 0.64
HMGA1-205ENST00000447654 BRCA2P51587 3418 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 INPP4BO15327 924 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 ASS1P00966 412 aaKnown RBP19.06■□□□□ 0.64
HMGA1-205ENST00000447654 ETV6P41212 452 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 RPS5P46782 204 aaKnown RBP19.06■□□□□ 0.64
HMGA1-205ENST00000447654 SLC9A3P48764 834 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 SRP54P61011 504 aaKnown RBP19.06■□□□□ 0.64
HMGA1-205ENST00000447654 MFSD10Q14728 455 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 CYP20A1Q6UW02 462 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 ARMCX2Q7L311 632 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 OMA1Q96E52 524 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 CYP2S1Q96SQ9 504 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 SLC30A3Q99726 388 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 APOL4Q9BPW4 351 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 MCMBPQ9BTE3 642 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 ALOXE3Q9BYJ1 711 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 KAT8Q9H7Z6 458 aaKnown RBP19.06■□□□□ 0.64
HMGA1-205ENST00000447654 EML4Q9HC35 981 aaKnown RBP19.06■□□□□ 0.64
HMGA1-205ENST00000447654 WDR6Q9NNW5 1121 aaKnown RBP19.06■□□□□ 0.64
HMGA1-205ENST00000447654 FBXL12Q9NXK8 326 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 OPTCQ9UBM4 332 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 INTS6Q9UL03 887 aaKnown RBP19.06■□□□□ 0.64
HMGA1-205ENST00000447654 C12orf71A8MTZ7 269 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 TK2O00142 265 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 TULP3O75386 442 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 MED26O95402 600 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 HOXC6P09630 235 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 RYKP34925 604 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 GMPRP36959 345 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 POLD2P49005 469 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 INCA1Q0VD86 236 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 TRAF3Q13114 568 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 MXD4Q14582 209 aaPredicted RBP19.06■□□□□ 0.64
HMGA1-205ENST00000447654 EFCAB12Q6NXP0 572 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 TBPL2Q6SJ96 375 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 PROSER1Q86XN7 944 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 GATAD2AQ86YP4 633 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 EMC1Q8N766 993 aa19.06■□□□□ 0.64
HMGA1-205ENST00000447654 CELF2-AS1Q8N7Q2 184 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms