RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 FUBP1Q96AE4 644 aaKnown RBP17.84■□□□□ 0.45
TRAPPC4-203ENST00000447216 HIC2Q96JB3 615 aa17.84■□□□□ 0.45
TRAPPC4-203ENST00000447216 EPB41L4BQ9H329 900 aa17.84■□□□□ 0.45
TRAPPC4-203ENST00000447216 WDR26Q9H7D7 661 aa17.84■□□□□ 0.45
TRAPPC4-203ENST00000447216 MOCS1Q9NZB8 636 aa17.84■□□□□ 0.45
TRAPPC4-203ENST00000447216 ZFC3H1O60293 1989 aaKnown RBP17.84■□□□□ 0.45
TRAPPC4-203ENST00000447216 A0A1W2PR77 199 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 A6NNZ2 444 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 CXorf49A8MYA2 514 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 RIPK2O43353 540 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 SLC25A14O95258 325 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 WNT1P04628 370 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 TEAD1P28347 426 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 TRIM23P36406 574 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 SLC1A2P43004 574 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 PFN3P60673 137 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 CTBP1Q13363 440 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 FRG1Q14331 258 aaKnown RBP17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 BRD3Q15059 726 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 UAP1Q16222 522 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 GPR33Q49SQ1 333 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 GPRC6AQ5T6X5 926 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 DOK6Q6PKX4 331 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 Q6ZSR6 202 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 NXPE1Q8N323 547 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 NAT14Q8WUY8 206 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 PIGKQ92643 395 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 ULK4Q96C45 1275 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 SGSM3Q96HU1 749 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 VPS35Q96QK1 796 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 PRRX2Q99811 253 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 TEX101Q9BY14 249 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 PHPT1Q9NRX4 125 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 TMEM74BQ9NUR3 256 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 TMEM98Q9Y2Y6 226 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 VPS13AQ96RL7 3174 aa17.83■□□□□ 0.44
TRAPPC4-203ENST00000447216 UQCRHLA0A096LP55 91 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 FAM159BA6NKW6 160 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 AGAP14A8MT82 685 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 SPAG6O75602 509 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 C1QAP02745 245 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 PYGLP06737 847 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 UQCRHP07919 91 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 THEGLP0DJG4 465 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 ACRV1P26436 265 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 CD38P28907 300 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 STX2P32856 288 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 PHBP35232 272 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 RACK1P63244 317 aaKnown RBP17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 MPP1Q00013 466 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 PDE1CQ14123 709 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 MAP9Q49MG5 647 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 TEDDM1Q5T9Z0 273 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 MRNIPQ6NTE8 343 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 ZC3H14Q6PJT7 736 aaKnown RBP17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 PHYKPLQ8IUZ5 450 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 GPR150Q8NGU9 434 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 COX14Q96I36 57 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 FAM167BQ9BTA0 163 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 BOCQ9BWV1 1114 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 FBXO6Q9NRD1 293 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 FAM86C1Q9NVL1 165 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 SMOXQ9NWM0 555 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 RABGEF1Q9UJ41 708 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 FBXO5Q9UKT4 447 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 MUC6Q6W4X9 2439 aa17.82■□□□□ 0.44
TRAPPC4-203ENST00000447216 CACNB4O00305 520 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 BCAT2O15382 392 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 ASMTLO95671 621 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 MYCLP1P12525 358 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 OGNP20774 298 aaKnown RBP17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 PMLP29590 882 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 AKT1P31749 480 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 HSD17B3P37058 310 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 ABCG1P45844 678 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 RABIFP47224 123 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 POLD2P49005 469 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 CSNK1EP49674 416 aaKnown RBP17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 B4GALNT1Q00973 533 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 SLC29A2Q14542 456 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 KBTBD12Q3ZCT8 623 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 ZNF789Q5FWF6 425 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 SDCCAG8Q86SQ7 713 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 CILP2Q8IUL8 1156 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 DDHD1Q8NEL9 900 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 CALML6Q8TD86 181 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 MRRFQ96E11 262 aaKnown RBP17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 KLHDC7BQ96G42 594 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 ZDHHC3Q9NYG2 299 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 ZFATQ9P243 1243 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 PILRBQ9UKJ0 227 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 PSAT1Q9Y617 370 aa17.81■□□□□ 0.44
TRAPPC4-203ENST00000447216 A0A087WUV0 522 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 CCDC151A5D8V7 595 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 TMEM202A6NGA9 273 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 OR1I1O60431 355 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 ERLIN1O75477 346 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 NDUFS3O75489 264 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 ABHD2P08910 425 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms