RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 RCBTB1Q8NDN9 531 aa20.54■□□□□ 0.88
SDC1-205ENST00000447124 TMEM159Q96B96 161 aa20.54■□□□□ 0.88
SDC1-205ENST00000447124 CMKLR1Q99788 373 aa20.54■□□□□ 0.88
SDC1-205ENST00000447124 SPATA16Q9BXB7 569 aa20.54■□□□□ 0.88
SDC1-205ENST00000447124 RBSNQ9H1K0 784 aa20.54■□□□□ 0.88
SDC1-205ENST00000447124 RMI1Q9H9A7 625 aa20.54■□□□□ 0.88
SDC1-205ENST00000447124 TMEM9Q9P0T7 183 aa20.54■□□□□ 0.88
SDC1-205ENST00000447124 TMPRSS11EQ9UL52 423 aa20.54■□□□□ 0.88
SDC1-205ENST00000447124 ZFC3H1O60293 1989 aaKnown RBP20.54■□□□□ 0.88
SDC1-205ENST00000447124 PRAMEF33A0A0G2JMD5 474 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 LOC285095A0A1B0GVY8 99 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 A6NCN8 305 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 EIF4E1BA6NMX2 242 aaKnown RBP20.53■□□□□ 0.88
SDC1-205ENST00000447124 C9orf172C9J069 976 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 K7ENP7 123 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 TK2O00142 265 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 GRID2O43424 1007 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 PRAMEF10O60809 474 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 ACP5P13686 325 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 BPIP17213 487 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 MPSTP25325 297 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 CSF2RBP32927 897 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 LIMK2P53671 638 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 MAPK10P53779 464 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 NOMO1Q15155 1222 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 TFDP3Q5H9I0 405 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.53■□□□□ 0.88
SDC1-205ENST00000447124 INO80CQ6PI98 192 aaPredicted RBP20.53■□□□□ 0.88
SDC1-205ENST00000447124 ADGRG6Q86SQ4 1221 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 ZC3H18Q86VM9 953 aaKnown RBP20.53■□□□□ 0.88
SDC1-205ENST00000447124 ZFAND4Q86XD8 727 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 TRAM1L1Q8N609 369 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 LSM14AQ8ND56 463 aaKnown RBP20.53■□□□□ 0.88
SDC1-205ENST00000447124 HAUS1Q96CS2 278 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 CCDC74BQ96LY2 380 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 GPR63Q9BZJ6 419 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 OR2AG1Q9H205 316 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 CARD9Q9H257 536 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 C10orf88Q9H8K7 445 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 TRIM39Q9HCM9 518 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 KCNK4Q9NYG8 393 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 FOXJ2Q9P0K8 574 aa20.53■□□□□ 0.88
SDC1-205ENST00000447124 KALRNO60229 2985 aa20.52■□□□□ 0.88
SDC1-205ENST00000447124 SLC25A14O95258 325 aaPredicted RBP20.52■□□□□ 0.88
SDC1-205ENST00000447124 SLC4A1P02730 911 aa20.52■□□□□ 0.88
SDC1-205ENST00000447124 NFKB1P19838 968 aa20.52■□□□□ 0.88
SDC1-205ENST00000447124 ZNF75DP51815 510 aa20.52■□□□□ 0.88
SDC1-205ENST00000447124 WNT3AP56704 352 aa20.52■□□□□ 0.88
SDC1-205ENST00000447124 DCDC1P59894 354 aa20.52■□□□□ 0.88
SDC1-205ENST00000447124 ZNF567Q8N184 647 aa20.52■□□□□ 0.88
SDC1-205ENST00000447124 P3H4Q92791 437 aa20.52■□□□□ 0.88
SDC1-205ENST00000447124 OXNAD1Q96HP4 312 aaPredicted RBP20.52■□□□□ 0.88
SDC1-205ENST00000447124 HERPUD2Q9BSE4 406 aa20.52■□□□□ 0.88
SDC1-205ENST00000447124 HEMGNQ9BXL5 484 aa20.52■□□□□ 0.88
SDC1-205ENST00000447124 BPIFA1Q9NP55 256 aa20.52■□□□□ 0.88
SDC1-205ENST00000447124 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.52■□□□□ 0.88
SDC1-205ENST00000447124 NFKBIL1Q9UBC1 381 aaPredicted RBP20.52■□□□□ 0.88
SDC1-205ENST00000447124 SLC23A2Q9UGH3 650 aa20.52■□□□□ 0.88
SDC1-205ENST00000447124 FAM153AQ9UHL3 310 aa20.52■□□□□ 0.88
SDC1-205ENST00000447124 EPN1Q9Y6I3 576 aaPredicted RBP20.52■□□□□ 0.88
SDC1-205ENST00000447124 DUSP10Q9Y6W6 482 aa20.52■□□□□ 0.88
SDC1-205ENST00000447124 ATMQ13315 3056 aa20.52■□□□□ 0.87
SDC1-205ENST00000447124 SOWAHDA6NJG2 315 aa20.51■□□□□ 0.87
SDC1-205ENST00000447124 F5H423 210 aaPredicted RBP20.51■□□□□ 0.87
SDC1-205ENST00000447124 ZW10O43264 779 aa20.51■□□□□ 0.87
SDC1-205ENST00000447124 FGF3P11487 239 aaPredicted RBP20.51■□□□□ 0.87
SDC1-205ENST00000447124 ARSDP51689 593 aa20.51■□□□□ 0.87
SDC1-205ENST00000447124 SPA17Q15506 151 aa20.51■□□□□ 0.87
SDC1-205ENST00000447124 C11orf63Q6NUN7 778 aa20.51■□□□□ 0.87
SDC1-205ENST00000447124 PID1Q7Z2X4 250 aa20.51■□□□□ 0.87
SDC1-205ENST00000447124 OR4D9Q8NGE8 314 aa20.51■□□□□ 0.87
SDC1-205ENST00000447124 TTC9Q92623 222 aa20.51■□□□□ 0.87
SDC1-205ENST00000447124 GLYATL1Q969I3 302 aa20.51■□□□□ 0.87
SDC1-205ENST00000447124 MRGPRX2Q96LB1 330 aa20.51■□□□□ 0.87
SDC1-205ENST00000447124 FCRL5Q96RD9 977 aa20.51■□□□□ 0.87
SDC1-205ENST00000447124 CCNL2Q96S94 520 aaPredicted RBP20.51■□□□□ 0.87
SDC1-205ENST00000447124 SLC38A3Q99624 504 aa20.51■□□□□ 0.87
SDC1-205ENST00000447124 ANP32EQ9BTT0 268 aa20.51■□□□□ 0.87
SDC1-205ENST00000447124 ZSCAN5AQ9BUG6 496 aa20.51■□□□□ 0.87
SDC1-205ENST00000447124 PRDM8Q9NQV8 689 aa20.51■□□□□ 0.87
SDC1-205ENST00000447124 PDP2Q9P2J9 529 aa20.51■□□□□ 0.87
SDC1-205ENST00000447124 REXO2Q9Y3B8 237 aaKnown RBP20.51■□□□□ 0.87
SDC1-205ENST00000447124 CHUKO15111 745 aa20.5■□□□□ 0.87
SDC1-205ENST00000447124 SNX2O60749 519 aa20.5■□□□□ 0.87
SDC1-205ENST00000447124 MTX2O75431 263 aa20.5■□□□□ 0.87
SDC1-205ENST00000447124 EPOP01588 193 aa20.5■□□□□ 0.87
SDC1-205ENST00000447124 FECHP22830 423 aa20.5■□□□□ 0.87
SDC1-205ENST00000447124 CYLC1P35663 651 aaPredicted RBP20.5■□□□□ 0.87
SDC1-205ENST00000447124 CHRNA4P43681 627 aa20.5■□□□□ 0.87
SDC1-205ENST00000447124 RHDQ02161 417 aa20.5■□□□□ 0.87
SDC1-205ENST00000447124 KHDC1Q4VXA5 237 aaKnown RBP20.5■□□□□ 0.87
SDC1-205ENST00000447124 ZNF569Q5MCW4 686 aa20.5■□□□□ 0.87
SDC1-205ENST00000447124 KIAA1614Q5VZ46 1190 aa20.5■□□□□ 0.87
SDC1-205ENST00000447124 CCDC70Q6NSX1 233 aa20.5■□□□□ 0.87
SDC1-205ENST00000447124 TMEM71Q6P5X7 295 aa20.5■□□□□ 0.87
SDC1-205ENST00000447124 CCDC81Q6ZN84 652 aa20.5■□□□□ 0.87
SDC1-205ENST00000447124 BBS12Q6ZW61 710 aa20.5■□□□□ 0.87
SDC1-205ENST00000447124 TTC30BQ8N4P2 665 aa20.5■□□□□ 0.87
SDC1-205ENST00000447124 HTR3CQ8WXA8 447 aa20.5■□□□□ 0.87
SDC1-205ENST00000447124 PMEPA1Q969W9 287 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms