RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 WT1P19544 449 aaPredicted RBP13.66□□□□□ -0.22
PTPRE-203ENST00000442830 IL4RP24394 825 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 ARSDP51689 593 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 ARSEP51690 589 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 SEPT6Q14141 434 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 CLCA4Q14CN2 919 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 NFKBIBQ15653 356 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 SLC14A2Q15849 920 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 ZNF569Q5MCW4 686 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 ANKS6Q68DC2 871 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 TXNRD3NBQ6F5E7 133 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 TRIM74Q86UV6 250 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 RBM12BQ8IXT5 1001 aaKnown RBP13.66□□□□□ -0.22
PTPRE-203ENST00000442830 CCDC13Q8IYE1 715 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 ARRDC2Q8TBH0 407 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 PTCD2Q8WV60 388 aaKnown RBP13.66□□□□□ -0.22
PTPRE-203ENST00000442830 JPH3Q8WXH2 748 aaPredicted RBP13.66□□□□□ -0.22
PTPRE-203ENST00000442830 NCSTNQ92542 709 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 FAF2Q96CS3 445 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 OCIAD1Q9NX40 245 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 CPNE7Q9UBL6 633 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 A6NCN8 305 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 GRID2O43424 1007 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 PROSCO94903 275 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 PRLP01236 227 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 TPM3P06753 285 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 H2AFZP0C0S5 128 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 ACP5P13686 325 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 CYP4F2P78329 520 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 MMRN1Q13201 1228 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 NFATC2Q13469 925 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 ZFYVE27Q5T4F4 411 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 H2AFVQ71UI9 128 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 KDELC2Q7Z4H8 507 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 CCNYQ8ND76 341 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 SPDYE1Q8NFV5 336 aaPredicted RBP13.65□□□□□ -0.22
PTPRE-203ENST00000442830 APOBEC4Q8WW27 367 aaKnown RBP13.65□□□□□ -0.22
PTPRE-203ENST00000442830 CTNNBL1Q8WYA6 563 aaPredicted RBP13.65□□□□□ -0.22
PTPRE-203ENST00000442830 BTBD6Q96KE9 485 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 NAP1L5Q96NT1 182 aaPredicted RBP13.65□□□□□ -0.22
PTPRE-203ENST00000442830 TRIM4Q9C037 500 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 BRD8Q9H0E9 1235 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 ZFYVE1Q9HBF4 777 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 TRIM39Q9HCM9 518 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 TMEM9Q9P0T7 183 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 TMEM63CQ9P1W3 806 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 TBC1D29Q9UFV1 150 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 CNOT6Q9ULM6 557 aaKnown RBP13.65□□□□□ -0.22
PTPRE-203ENST00000442830 CAPN11Q9UMQ6 739 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 LUC7L2Q9Y383 392 aaKnown RBP13.65□□□□□ -0.22
PTPRE-203ENST00000442830 PLEKHM1Q9Y4G2 1056 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 KCTD3Q9Y597 815 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 PCDHB3Q9Y5E6 796 aa13.65□□□□□ -0.22
PTPRE-203ENST00000442830 KMOO15229 486 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 VEGFDO43915 354 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 STK17BO94768 372 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 SLC25A14O95258 325 aaPredicted RBP13.64□□□□□ -0.23
PTPRE-203ENST00000442830 ATP1A1P05023 1023 aaKnown RBP13.64□□□□□ -0.23
PTPRE-203ENST00000442830 HLA-DQB2P05538 268 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 CD48P09326 243 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 ZFXP17010 805 aaPredicted RBP13.64□□□□□ -0.23
PTPRE-203ENST00000442830 VCLP18206 1134 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 XRCC1P18887 633 aaPredicted RBP13.64□□□□□ -0.23
PTPRE-203ENST00000442830 MPSTP25325 297 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 IFI35P80217 286 aaPredicted RBP13.64□□□□□ -0.23
PTPRE-203ENST00000442830 TLE1Q04724 770 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 CDC20Q12834 499 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 IL11RAQ14626 422 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 QPCTQ16769 361 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 SNAP47Q5SQN1 464 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 CCDC70Q6NSX1 233 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 RFLNAQ6ZTI6 216 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 TRIM48Q8IWZ4 208 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 C9orf43Q8TAL5 461 aaPredicted RBP13.64□□□□□ -0.23
PTPRE-203ENST00000442830 AGAP2Q99490 1192 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 TIMM29Q9BSF4 260 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 SPATA16Q9BXB7 569 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 SPRY4Q9C004 299 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 MAGEE1Q9HCI5 957 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 POT1Q9NUX5 634 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 CTTNBP2NLQ9P2B4 639 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 KCNK6Q9Y257 313 aa13.64□□□□□ -0.23
PTPRE-203ENST00000442830 OAS3Q9Y6K5 1087 aaKnown RBP13.64□□□□□ -0.23
PTPRE-203ENST00000442830 A0A087X0T9 212 aa13.63□□□□□ -0.23
PTPRE-203ENST00000442830 A8MU76 341 aa13.63□□□□□ -0.23
PTPRE-203ENST00000442830 FADS2P1A8MWK0 482 aa13.63□□□□□ -0.23
PTPRE-203ENST00000442830 PPP1R12AO14974 1030 aaPredicted RBP13.63□□□□□ -0.23
PTPRE-203ENST00000442830 SNX2O60749 519 aa13.63□□□□□ -0.23
PTPRE-203ENST00000442830 KCNJ13O60928 360 aa13.63□□□□□ -0.23
PTPRE-203ENST00000442830 DLGAP3O95886 979 aa13.63□□□□□ -0.23
PTPRE-203ENST00000442830 VIPP01282 170 aa13.63□□□□□ -0.23
PTPRE-203ENST00000442830 C9P02748 559 aa13.63□□□□□ -0.23
PTPRE-203ENST00000442830 MT-ND3P03897 115 aa13.63□□□□□ -0.23
PTPRE-203ENST00000442830 FAM228BP0C875 321 aa13.63□□□□□ -0.23
PTPRE-203ENST00000442830 TCN2P20062 427 aa13.63□□□□□ -0.23
PTPRE-203ENST00000442830 GJC1P36383 396 aa13.63□□□□□ -0.23
PTPRE-203ENST00000442830 CASRP41180 1078 aa13.63□□□□□ -0.23
PTPRE-203ENST00000442830 CD86P42081 329 aa13.63□□□□□ -0.23
PTPRE-203ENST00000442830 STAT5AP42229 794 aa13.63□□□□□ -0.23
PTPRE-203ENST00000442830 UBASH3AP57075 661 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms