RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 CES2O00748 559 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 PHYHO14832 338 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 RP2O75695 350 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 LGI1O95970 557 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 SERPINA6P08185 405 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 ANXA3P12429 323 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 SAT1P21673 171 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 ADH7P40394 386 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 MNDAP41218 407 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 MAP3K8P41279 467 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 TGM4P49221 684 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 ITGA8P53708 1063 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 SREBF2Q12772 1141 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 TRAM1Q15629 374 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 C6orf132Q5T0Z8 1188 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 THEM4Q5T1C6 240 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 KYAT3Q6YP21 454 aaKnown RBP5.57□□□□□ -1.52
PTPRC-209ENST00000442510 ZNF782Q6ZMW2 699 aaPredicted RBP5.57□□□□□ -1.52
PTPRC-209ENST00000442510 ZDHHC13Q8IUH4 622 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 PPM1KQ8N3J5 372 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 KLHL36Q8N4N3 616 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 MCUQ8NE86 351 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 TTC16Q8NEE8 873 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 C2CD4CQ8TF44 421 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 C16orf78Q8WTQ4 265 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 DPF1Q92782 380 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 SH3YL1Q96HL8 342 aaPredicted RBP5.57□□□□□ -1.52
PTPRC-209ENST00000442510 DIRAS2Q96HU8 199 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 CHCHD6Q9BRQ6 235 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 C11orf84Q9BUA3 381 aaPredicted RBP5.57□□□□□ -1.52
PTPRC-209ENST00000442510 TLR10Q9BXR5 811 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 GOLPH3Q9H4A6 298 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 RERGLQ9H628 205 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 C3orf14Q9HBI5 128 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 ZNF275Q9NSD4 429 aaPredicted RBP5.57□□□□□ -1.52
PTPRC-209ENST00000442510 IL37Q9NZH6 218 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 NCKAP1Q9Y2A7 1128 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 RNF215Q9Y6U7 377 aa5.57□□□□□ -1.52
PTPRC-209ENST00000442510 H3BMQ9 156 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 TEX46H3BTG2 121 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 EEF2KO00418 725 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 RSL1D1O76021 490 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 VNN2O95498 520 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ODC1P11926 461 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 CASP9P55211 416 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 NCS1P62166 190 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 TEKQ02763 1124 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 CLCQ05315 142 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 MAP4K2Q12851 820 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 SELENBP1Q13228 472 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ORC2Q13416 577 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PDIA6Q15084 440 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 CDNFQ49AH0 187 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 GPAT3Q53EU6 434 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 MTX3Q5HYI7 312 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 TCTE1Q5JU00 501 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 FAXCQ5TGI0 409 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 BSPRYQ5W0U4 402 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ABLIM2Q6H8Q1 611 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PDE12Q6L8Q7 609 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 NANOGP8Q6NSW7 305 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 MZT2AQ6P582 158 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 CLEC9AQ6UXN8 241 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ERMP1Q7Z2K6 904 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 MAMDC2Q7Z304 686 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PEG10Q86TG7 708 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 CMTR2Q8IYT2 770 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 EID3Q8N140 333 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ACBD4Q8NC06 268 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.56□□□□□ -1.526e-8■■■■■ 31.9
PTPRC-209ENST00000442510 SLC35G2Q8TBE7 412 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 CPNE4Q96A23 557 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 TSGA13Q96PP4 275 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ADPGKQ9BRR6 497 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 RTKNQ9BST9 563 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 C1QTNF7Q9BXJ2 289 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 MUC13Q9H3R2 512 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 SNX15Q9NRS6 342 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 MYEF2Q9P2K5 600 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 NUFIP1Q9UHK0 495 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 TRAF6Q9Y4K3 522 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 SMCO3A2RU48 225 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ZNF99A8MXY4 864 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 EFCAB9A8MZ26 197 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 GTPBP1O00178 669 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 DCXO43602 365 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 SLC22A5O76082 557 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 SNRPA1P09661 255 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 STAG3L3P0CL85 134 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 RNF224P0DH78 156 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 CYP7A1P22680 504 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 KLRC1P26715 233 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 GRK5P34947 590 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 PREPP48147 710 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 MECP2P51608 486 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 SAMD4BQ5PRF9 694 aaKnown RBP5.56□□□□□ -1.52
PTPRC-209ENST00000442510 CLEC2AQ6UVW9 174 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 NAPRTQ6XQN6 538 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ENOSF1Q7L5Y1 443 aa5.56□□□□□ -1.52
PTPRC-209ENST00000442510 ANKS1BQ7Z6G8 1248 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms