RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 ARL13AQ5H913 290 aaPredicted RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 LRRC66Q68CR7 880 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 NXNQ6DKJ4 435 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 ASTLQ6HA08 431 aaPredicted RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 ZNF549Q6P9A3 640 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 TTC7BQ86TV6 843 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 NRSN1Q8IZ57 195 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 PTGR2Q8N8N7 351 aaPredicted RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 OR2A12Q8NGT7 310 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 DTX3LQ8TDB6 740 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 CYB5D2Q8WUJ1 264 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 SKA1Q96BD8 255 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 NECTIN4Q96NY8 510 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 FAM126AQ9BYI3 521 aaPredicted RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 FAM83DQ9H4H8 585 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 CYP4F12Q9HCS2 524 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 TCF7L2Q9NQB0 619 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 PNPOQ9NVS9 261 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 LMCD1Q9NZU5 365 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 NFKBIL1Q9UBC1 381 aaPredicted RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 TRBV5-4A0A0C4DH59 114 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 TBC1D3BA6NDS4 549 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 ANKRD65E5RJM6 399 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 ZBTB14O43829 449 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 VPS4BO75351 444 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 CIB2O75838 187 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 FTH1P02794 183 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 CISD3P0C7P0 127 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 NCF2P19878 526 aaPredicted RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 MSH3P20585 1137 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 ACRV1P26436 265 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 PRDX6P30041 224 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 PBX2P40425 430 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 MAPK9P45984 424 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 ALDH18A1P54886 795 aaKnown RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 DCDC1P59894 354 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 KDSRQ06136 332 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 DLG1Q12959 904 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 CDC16Q13042 620 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 RUNX3Q13761 415 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 TTC31Q49AM3 519 aaPredicted RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 ARSIQ5FYB1 569 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 PAQR3Q6TCH7 311 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 SERPINA13PQ6UXR4 307 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 MACC1Q6ZN28 852 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 DPPA4Q7L190 304 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 ZBTB2Q8N680 514 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 TXNDC5Q8NBS9 432 aaKnown RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 TMIEQ8NEW7 156 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 OR6Y1Q8NGX8 325 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 CSGALNACT1Q8TDX6 532 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 CMTM5Q96DZ9 223 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 L3HYPDHQ96EM0 354 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 PDLIM5Q96HC4 596 aaKnown RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 TMEM237Q96Q45 408 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 SPATA16Q9BXB7 569 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 LRMDAQ9H2I8 198 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 SPATS2LQ9NUQ6 558 aaKnown RBP5.98□□□□□ -1.45
VPS50-205ENST00000441602 NDE1Q9NXR1 346 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 HAO1Q9UJM8 370 aa5.98□□□□□ -1.45
VPS50-205ENST00000441602 TTC34A8MYJ7 566 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 TARM1B6A8C7 271 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 NEMP1O14524 444 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 MLYCDO95822 493 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 ARSAP15289 507 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 MPSTP25325 297 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 GKP32189 559 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 PIK3CGP48736 1102 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 SPINT3P49223 89 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 CCR3P51677 355 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 STX1BP61266 288 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 HERVK_113P63132 956 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 SFSWAPQ12872 951 aaKnown RBP5.97□□□□□ -1.45
VPS50-205ENST00000441602 GTF2H3Q13889 308 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 ITPRIPL2Q3MIP1 535 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 TCEAL5Q5H9L2 206 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 LDLRAP1Q5SW96 308 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 SDE2Q6IQ49 451 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 FBXL19Q6PCT2 694 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 PIM3Q86V86 326 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 PIANPQ8IYJ0 282 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 CHCHD4Q8N4Q1 142 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 TRAM1L1Q8N609 369 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 TERB1Q8NA31 727 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 CHST14Q8NCH0 376 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 OR56A4Q8NGH8 313 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 ABHD8Q96I13 439 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 NSMCE3Q96MG7 304 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 ZSCAN5AQ9BUG6 496 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 APOL5Q9BWW9 433 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 ERVK-6Q9BXR3 956 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 EBF3Q9H4W6 596 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 IL26Q9NPH9 171 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 LNPEPQ9UIQ6 1025 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 ANGPTL3Q9Y5C1 460 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 NPIPB15A6NHN6 443 aaPredicted RBP5.97□□□□□ -1.45
VPS50-205ENST00000441602 GYG2O15488 501 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 NIPSNAP2O75323 286 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 LEFTY1O75610 366 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 TRIM16O95361 564 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms